RNA–Protein interactions for RNA: ENST00000578954.5

SS18-211, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 756 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-211ENST00000578954 RAMP1O60894 148 aa14.42□□□□□ -0.1
SS18-211ENST00000578954 PPP1R3DO95685 299 aa14.42□□□□□ -0.1
SS18-211ENST00000578954 F13BP05160 661 aa14.42□□□□□ -0.1
SS18-211ENST00000578954 GABRB1P18505 474 aa14.42□□□□□ -0.1
SS18-211ENST00000578954 RPL4P36578 427 aaKnown RBP14.42□□□□□ -0.1
SS18-211ENST00000578954 CTXN1P60606 82 aa14.42□□□□□ -0.1
SS18-211ENST00000578954 CDC42P60953 191 aa14.42□□□□□ -0.1
SS18-211ENST00000578954 ISL1P61371 349 aa14.42□□□□□ -0.1
SS18-211ENST00000578954 ST3GAL2Q16842 350 aa14.42□□□□□ -0.1
SS18-211ENST00000578954 EMC4Q5J8M3 183 aa14.42□□□□□ -0.1
SS18-211ENST00000578954 GPR139Q6DWJ6 353 aa14.42□□□□□ -0.1
SS18-211ENST00000578954 IGFN1Q86VF2 1251 aa14.42□□□□□ -0.1
SS18-211ENST00000578954 PM20D2Q8IYS1 436 aa14.42□□□□□ -0.1
SS18-211ENST00000578954 C8orf59Q8N0T1 100 aaPredicted RBP14.42□□□□□ -0.1
SS18-211ENST00000578954 CISD2Q8N5K1 135 aaKnown RBP14.42□□□□□ -0.1
SS18-211ENST00000578954 FAM81AQ8TBF8 368 aa14.42□□□□□ -0.1
SS18-211ENST00000578954 TRUB1Q8WWH5 349 aaKnown RBP14.42□□□□□ -0.1
SS18-211ENST00000578954 SNRNP40Q96DI7 357 aaKnown RBP14.42□□□□□ -0.1
SS18-211ENST00000578954 ZNF845Q96IR2 970 aaPredicted RBP14.42□□□□□ -0.1
SS18-211ENST00000578954 OXGR1Q96P68 337 aa14.42□□□□□ -0.1
SS18-211ENST00000578954 TEX12Q9BXU0 123 aa14.42□□□□□ -0.1
SS18-211ENST00000578954 TXNIPQ9H3M7 391 aa14.42□□□□□ -0.1
SS18-211ENST00000578954 CMC2Q9NRP2 79 aa14.42□□□□□ -0.1
SS18-211ENST00000578954 LRCH1Q9Y2L9 728 aa14.42□□□□□ -0.1
SS18-211ENST00000578954 NOX1Q9Y5S8 564 aa14.42□□□□□ -0.1
SS18-211ENST00000578954 C11orf98E9PRG8 122 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 RNF13O43567 381 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 TRAF3IP2O43734 574 aaPredicted RBP14.41□□□□□ -0.1
SS18-211ENST00000578954 CYTIPO60759 359 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 SDHAP31040 664 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 PCYT1AP49585 367 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 SLC16A1P53985 500 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 SNRPGP62308 76 aaKnown RBP14.41□□□□□ -0.1
SS18-211ENST00000578954 ERVK-25P63136 954 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 HSF1Q00613 529 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 MYBPC1Q00872 1141 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 TEKQ02763 1124 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 SRYQ05066 204 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 MED21Q13503 144 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 MAD2L1BPQ15013 274 aaPredicted RBP14.41□□□□□ -0.1
SS18-211ENST00000578954 PDK3Q15120 406 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 ZNF362Q5T0B9 420 aaPredicted RBP14.41□□□□□ -0.1
SS18-211ENST00000578954 CASP12Q6UXS9 341 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 THAP5Q7Z6K1 395 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 ENTHD1Q8IYW4 607 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 OR8J1Q8NGP2 316 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 ZPLD1Q8TCW7 415 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 RNF128Q8TEB7 428 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 SLC38A2Q96QD8 506 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 TSPAN32Q96QS1 320 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 UCN2Q96RP3 112 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 TUBA1CQ9BQE3 449 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 ZNF226Q9NYT6 803 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 TVP23BQ9NYZ1 205 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 TNFRSF10DQ9UBN6 386 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 RNF6Q9Y252 685 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 ADAM18Q9Y3Q7 739 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 ZNF175Q9Y473 711 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 IER3IP1Q9Y5U9 82 aa14.41□□□□□ -0.1
SS18-211ENST00000578954 ZNF716A6NP11 495 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 MPZL2O60487 215 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 HLA-DOBP13765 273 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 AHCYP23526 432 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 RPL27P61353 136 aaKnown RBP14.4□□□□□ -0.1
SS18-211ENST00000578954 CD47Q08722 323 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 SLC17A1Q14916 467 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 ACKR1Q16570 336 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 C3AR1Q16581 482 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 TMEM201Q5SNT2 666 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 SLC25A30Q5SVS4 291 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 ARMC4Q5T2S8 1044 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 TMEM225Q6GV28 225 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 CCDC103Q8IW40 242 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 UEVLDQ8IX04 471 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 KDM8Q8N371 416 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 LSM14AQ8ND56 463 aaKnown RBP14.4□□□□□ -0.1
SS18-211ENST00000578954 RHOXF1Q8NHV9 184 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 ZNF519Q8TB69 540 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 Q96M85 177 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 ERMAPQ96PL5 475 aaPredicted RBP14.4□□□□□ -0.1
SS18-211ENST00000578954 SNX18Q96RF0 628 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 DDOQ99489 341 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 FN3KQ9H479 309 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 KLHL21Q9UJP4 597 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 ZNF346Q9UL40 294 aaKnown RBP14.4□□□□□ -0.1
SS18-211ENST00000578954 MCTS1Q9ULC4 181 aaKnown RBP14.4□□□□□ -0.1
SS18-211ENST00000578954 CAMK2AQ9UQM7 478 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 ATRXP46100 2492 aa14.4□□□□□ -0.1
SS18-211ENST00000578954 ITPR1Q14643 2758 aa14.39□□□□□ -0.11
SS18-211ENST00000578954 IGKV3D-15A0A087WSY6 115 aa14.39□□□□□ -0.11
SS18-211ENST00000578954 IGHV3-15A0A0B4J1V0 119 aa14.39□□□□□ -0.11
SS18-211ENST00000578954 A0A1W2PRG6 482 aa14.39□□□□□ -0.11
SS18-211ENST00000578954 NPIPA2E9PIF3 369 aa14.39□□□□□ -0.11
SS18-211ENST00000578954 NPIPA3F8WFD2 350 aa14.39□□□□□ -0.11
SS18-211ENST00000578954 PRKYO43930 277 aa14.39□□□□□ -0.11
SS18-211ENST00000578954 SYNGR4O95473 234 aa14.39□□□□□ -0.11
SS18-211ENST00000578954 DAP3P51398 398 aaKnown RBP14.39□□□□□ -0.11
SS18-211ENST00000578954 POU3F1Q03052 451 aaPredicted RBP14.39□□□□□ -0.11
SS18-211ENST00000578954 LY6DQ14210 128 aa14.39□□□□□ -0.11
SS18-211ENST00000578954 SNAPC1Q16533 368 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms