RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 LAPTM4AQ15012 233 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 TRIP10Q15642 601 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 ZNF770Q6IQ21 691 aaPredicted RBP10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 SMARCD3Q6STE5 483 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 RASSF6Q6ZTQ3 369 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 PXKQ7Z7A4 578 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 GALNT5Q7Z7M9 940 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 CLDN22Q8N7P3 220 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 OR9K2Q8NGE7 335 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 OR13C2Q8NGS9 318 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 OR51A7Q8NH64 312 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 FANK1Q8TC84 345 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 GTPBP3Q969Y2 492 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 TEX12Q9BXU0 123 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 VCX3BQ9H321 246 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 FANCFQ9NPI8 374 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 INIPQ9NRY2 104 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 KRT84Q9NSB2 600 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 KLHL13Q9P2N7 655 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 OAZ3Q9UMX2 235 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 POFUT2Q9Y2G5 429 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 FAM215AQ9Y5M1 114 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 IGKV3D-15A0A087WSY6 115 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 TRAV27A0A087WT01 109 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 LOC102725191A0A1B0GVB3 256 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 OR6C65A6NJZ3 312 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 ZNF726A6NNF4 738 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 MCIDASD6RGH6 385 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 C11orf98E9PRG8 122 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 H3BN98 237 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 LRRTM2O43300 516 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 SS18L1O75177 396 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 TGM6O95932 706 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 HPRP00739 348 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 GLI4P10075 376 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 POU2F1P14859 743 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 FUT4P22083 530 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 IGFBP5P24593 272 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 UQCRC1P31930 480 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 OPRM1P35372 400 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 RPS6KA3P51812 740 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 RAD23AP54725 363 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 RPS4XP62701 263 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 POU3F1Q03052 451 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 SLC34A1Q06495 639 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 RPL18Q07020 188 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 PMPCAQ10713 525 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 RTL6Q6ICC9 239 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 CD300LDQ6UXZ3 194 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 C3P1Q6ZMU1 363 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 ZBTB49Q6ZSB9 765 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 FAM214BQ7L5A3 538 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 TMEM179BQ7Z7N9 219 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 FJX1Q86VR8 437 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 CCDC103Q8IW40 242 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 LRRC17Q8N6Y2 441 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 C9orf106Q8NAJ2 232 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 OR6K3Q8NGY3 331 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 TEX47Q8TBZ9 253 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 ABHD3Q8WU67 409 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 ADAD1Q96M93 576 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 PSMG3-AS1Q96PY0 264 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 CIB1Q99828 191 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 SFXN3Q9BWM7 321 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 RNPEPL1Q9HAU8 725 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 BCO1Q9HAY6 547 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 PAPOLBQ9NRJ5 636 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 NOSIPQ9Y314 301 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 CDH10Q9Y6N8 788 aa10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 USP9YO00507 2555 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP3-210ENST00000578733 FREM1Q5H8C1 2179 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 NPIPB13A6NJU9 1138 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 NPIPB4C9JG80 1138 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 MS4A18H0YCH9 400 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 CDC42EP2O14613 210 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 DVL2O14641 736 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 KLF4O43474 513 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 MRPL33O75394 65 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 SERPINI2O75830 405 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 AQP8O94778 261 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 IL18BPO95998 194 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 BCL10O95999 233 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 NR2C1P13056 603 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 OSMP13725 252 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 CTSSP25774 331 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 CEACAM8P31997 349 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 AQP2P41181 271 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 UQCRFS1P47985 274 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 ALDH3A2P51648 485 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 LSM11P83369 360 aaKnown RBP eCLIP10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 DAG1Q14118 895 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 SLC17A1Q14916 467 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 RFX4Q33E94 735 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 MS4A18Q3C1V0 323 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 FAM205BPQ63HN1 556 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 FAHD1Q6P587 224 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 DPY19L2P2Q6ZN68 376 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 ZNF620Q6ZNG0 422 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 SLC35D2Q76EJ3 337 aa10.04□□□□□ -0.8
CDK5RAP3-210ENST00000578733 PACRGLQ8N7B6 248 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms