RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 JKAMPQ9P055 326 aa11.29□□□□□ -0.6
MKS1-206ENST00000577824 C6orf203Q9P0P8 240 aaPredicted RBP11.29□□□□□ -0.6
MKS1-206ENST00000577824 RNF6Q9Y252 685 aa11.29□□□□□ -0.6
MKS1-206ENST00000577824 RCE1Q9Y256 329 aa11.29□□□□□ -0.6
MKS1-206ENST00000577824 EMC9Q9Y3B6 208 aa11.29□□□□□ -0.6
MKS1-206ENST00000577824 NOX1Q9Y5S8 564 aa11.29□□□□□ -0.6
MKS1-206ENST00000577824 ESPL1Q14674 2120 aa11.29□□□□□ -0.6
MKS1-206ENST00000577824 DOPEY1Q5JWR5 2465 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 PLGP00747 810 aaPredicted RBP11.28□□□□□ -0.6
MKS1-206ENST00000577824 CGAP01215 116 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 GASTP01350 101 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 HIST1H2ABP04908 130 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 ADORA3P0DMS8 318 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 CD8BP10966 210 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 ANXA8P13928 327 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 GSTM3P21266 225 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 CHRNB4P30926 498 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 OPRM1P35372 400 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 ARHGDIAP52565 204 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 PER3P56645 1201 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 PPP2R2BQ00005 443 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 COX10Q12887 443 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 FOXD4Q12950 439 aaPredicted RBP11.28□□□□□ -0.6
MKS1-206ENST00000577824 ZBED5Q49AG3 693 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 TMEM225Q6GV28 225 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 PPP4R4Q6NUP7 873 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 RASSF6Q6ZTQ3 369 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 HIST3H2AQ7L7L0 130 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 AMIGO2Q86SJ2 522 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 ZDHHC13Q8IUH4 622 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 MCEMP1Q8IX19 187 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 TUSC5Q8IXB3 177 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 HS3ST5Q8IZT8 346 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 ANKK1Q8NFD2 765 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 ASB5Q8WWX0 329 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 HIST1H2ACQ93077 130 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 FEVQ99581 238 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 NIPSNAP1Q9BPW8 284 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 PIGMQ9H3S5 423 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 PDP1Q9P0J1 537 aaPredicted RBP11.28□□□□□ -0.6
MKS1-206ENST00000577824 OAZ3Q9UMX2 235 aa11.28□□□□□ -0.6
MKS1-206ENST00000577824 GCN1Q92616 2671 aaKnown RBP11.28□□□□□ -0.6
MKS1-206ENST00000577824 MED12LQ86YW9 2145 aa11.27□□□□□ -0.6
MKS1-206ENST00000577824 TRAV27A0A087WT01 109 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 UNC119BA6NIH7 251 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 G3V2T6 193 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 ZNF432O94892 652 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 NDUFB2O95178 105 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 TP53P04637 393 aaPredicted RBP11.27□□□□□ -0.61
MKS1-206ENST00000577824 HLA-DOBP13765 273 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 ZNF23P17027 643 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 ZNF43P17038 809 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 NTF4P34130 210 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 AQP2P41181 271 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 SMSP52788 366 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 POU3F1Q03052 451 aaPredicted RBP11.27□□□□□ -0.61
MKS1-206ENST00000577824 SRSF1Q07955 248 aaKnown RBP eCLIP11.27□□□□□ -0.61
MKS1-206ENST00000577824 RCN1Q15293 331 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 TAF11Q15544 211 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 SLC25A35Q3KQZ1 300 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 FBXL19-AS1Q494R0 122 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 ALG10Q5BKT4 473 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 TMEM201Q5SNT2 666 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 RPL13AP3Q6NVV1 102 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 VWA1Q6PCB0 445 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 SMARCD3Q6STE5 483 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 GALNT5Q7Z7M9 940 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 GPAT4Q86UL3 456 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 MEX3DQ86XN8 651 aaKnown RBP11.27□□□□□ -0.61
MKS1-206ENST00000577824 UEVLDQ8IX04 471 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 PARP8Q8N3A8 854 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 ZNF808Q8N4W9 903 aaPredicted RBP11.27□□□□□ -0.61
MKS1-206ENST00000577824 RELL2Q8NC24 303 aaPredicted RBP11.27□□□□□ -0.61
MKS1-206ENST00000577824 MOSPD2Q8NHP6 518 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 FANK1Q8TC84 345 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 ITLN2Q8WWU7 325 aaPredicted RBP11.27□□□□□ -0.61
MKS1-206ENST00000577824 STARD4Q96DR4 205 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 ZNF385AQ96PM9 386 aaKnown RBP11.27□□□□□ -0.61
MKS1-206ENST00000577824 DCLRE1BQ9H816 532 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 PLSCR4Q9NRQ2 329 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 IL20Q9NYY1 176 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 COQ3Q9NZJ6 369 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 STX18Q9P2W9 335 aaKnown RBP11.27□□□□□ -0.61
MKS1-206ENST00000577824 REV1Q9UBZ9 1251 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 CLEC4AQ9UMR7 237 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 CDH10Q9Y6N8 788 aa11.27□□□□□ -0.61
MKS1-206ENST00000577824 CENPBD1B2RD01 187 aa11.26□□□□□ -0.61
MKS1-206ENST00000577824 MCIDASD6RGH6 385 aa11.26□□□□□ -0.61
MKS1-206ENST00000577824 BLOC1S5-TXNDC5H3BN57 136 aa11.26□□□□□ -0.61
MKS1-206ENST00000577824 PYCARD-AS1I3L0S3 204 aa11.26□□□□□ -0.61
MKS1-206ENST00000577824 DVL2O14641 736 aa11.26□□□□□ -0.61
MKS1-206ENST00000577824 RNF13O43567 381 aa11.26□□□□□ -0.61
MKS1-206ENST00000577824 OR6A2O95222 327 aa11.26□□□□□ -0.61
MKS1-206ENST00000577824 CNOT4O95628 575 aaKnown RBP11.26□□□□□ -0.61
MKS1-206ENST00000577824 APEHP13798 732 aaKnown RBP11.26□□□□□ -0.61
MKS1-206ENST00000577824 ANPEPP15144 967 aa11.26□□□□□ -0.61
MKS1-206ENST00000577824 OR3A2P47893 321 aa11.26□□□□□ -0.61
MKS1-206ENST00000577824 PCYT1AP49585 367 aa11.26□□□□□ -0.61
MKS1-206ENST00000577824 KDM4DQ6B0I6 523 aa11.26□□□□□ -0.61
MKS1-206ENST00000577824 XKRXQ6PP77 449 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms