RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 HIST1H2ACQ93077 130 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 SNF8Q96H20 258 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 B3GALT6Q96L58 329 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 PRRC1Q96M27 445 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 C9orf85Q96MD7 179 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 ALG12Q9BV10 488 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 NLNQ9BYT8 704 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 BLZF1Q9H2G9 400 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 C6orf50Q9HD87 102 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 NRBP2Q9NSY0 501 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 ANAPC11Q9NYG5 84 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 IL17CQ9P0M4 197 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 CTSFQ9UBX1 484 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 CRLS1Q9UJA2 301 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 STAP1Q9ULZ2 295 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 ENTPD4Q9Y227 616 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 SLC22A14Q9Y267 594 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 CFL2Q9Y281 166 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 PPIL1Q9Y3C6 166 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 ZNF175Q9Y473 711 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 MAD1L1Q9Y6D9 718 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 MYO5AQ9Y4I1 1855 aaKnown RBP3.72□□□□□ -1.81
NUP88-213ENST00000576862 A0A0U1RQV5 110 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 EI24O14681 340 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 SLC37A4O43826 429 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 NME2P1O60361 137 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 ZNF189O75820 626 aaPredicted RBP3.71□□□□□ -1.82
NUP88-213ENST00000576862 AHSA1O95433 338 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 TDP2O95551 362 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 ZNF18P17022 549 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 SRMP19623 302 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 PTNP21246 168 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 ATP6V1C1P21283 382 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 ZBTB25P24278 435 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 CASP1P29466 404 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 GNA11P29992 359 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 GPR4P46093 362 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 OR1D4P47884 311 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 NPY2RP49146 381 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 CCL11P51671 97 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 CCNG1P51959 295 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 DGCR6Q14129 220 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 CASP8Q14790 479 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 ZNF528Q3MIS6 628 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 HSDL1Q3SXM5 330 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 USH1GQ495M9 461 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 HIKESHIQ53FT3 197 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 SCARA5Q6ZMJ2 495 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 FRA10AC1Q70Z53 315 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 YRDCQ86U90 279 aaKnown RBP3.71□□□□□ -1.82
NUP88-213ENST00000576862 LRRC75A-AS1Q8N1F1 130 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 BCORP1Q8N888 145 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 MINDY2Q8NBR6 621 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 FNDC8Q8TC99 324 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 LHX4Q969G2 390 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 PAGE5Q96GU1 130 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 SLC29A1Q99808 456 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 GON7Q9BXV9 100 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 DEFB129Q9H1M3 183 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 APMAPQ9HDC9 416 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 CHRAC1Q9NRG0 131 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 ATXN10Q9UBB4 475 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 MIOXQ9UGB7 285 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 ADAMTSL1Q8N6G6 1762 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 SCN9AQ15858 1988 aa3.71□□□□□ -1.82
NUP88-213ENST00000576862 SF3B1O75533 1304 aaKnown RBP eCLIP3.7□□□□□ -1.82
NUP88-213ENST00000576862 MYH7P12883 1935 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 MACROD2A1Z1Q3 448 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 PCP4L1A6NKN8 68 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.7□□□□□ -1.82
NUP88-213ENST00000576862 LAD1O00515 517 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 NDUFAB1O14561 156 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 CALUO43852 315 aaPredicted RBP3.7□□□□□ -1.82
NUP88-213ENST00000576862 VPS26AO75436 327 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 RBBP9O75884 186 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 CABYRO75952 493 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 CLPXO76031 633 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 SYNGR4O95473 234 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 HLA-DRAP01903 254 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 CLTAP09496 248 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 ALOX5P09917 674 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 ALPIP09923 528 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 CT45A10P0DMU9 189 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 AKT2P31751 481 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 IL2RGP31785 369 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 HSPA13P48723 471 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 GDI2P50395 445 aaKnown RBP3.7□□□□□ -1.82
NUP88-213ENST00000576862 RAB9AP51151 201 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 STX17P56962 302 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 DAOAP59103 153 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 POLR2GP62487 172 aaKnown RBP eCLIP3.7□□□□□ -1.82
NUP88-213ENST00000576862 PLOD1Q02809 727 aaPredicted RBP3.7□□□□□ -1.82
NUP88-213ENST00000576862 SLAQ13239 276 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 DMC1Q14565 340 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 KIAA0040Q15053 153 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 EXOC3L2Q2M3D2 409 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 PARP6Q2NL67 630 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 TEX44Q53QW1 395 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 MLIPQ5VWP3 458 aa3.7□□□□□ -1.82
NUP88-213ENST00000576862 TTC23LQ6PF05 361 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms