RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 RAC3P60763 192 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 DBPQ10586 325 aaPredicted RBP7.02□□□□□ -1.29
CCDC40-215ENST00000576033 PPP1R8Q12972 351 aaKnown RBP7.02□□□□□ -1.29
CCDC40-215ENST00000576033 SEC23BQ15437 767 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 HSPB2Q16082 182 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 TTC23Q5W5X9 447 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 SLC46A3Q7Z3Q1 461 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 ZNF610Q8N9Z0 462 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 PIK3C3Q8NEB9 887 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 LILRB4Q8NHJ6 448 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 ZNF417Q8TAU3 575 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 SLC25A43Q8WUT9 341 aaPredicted RBP7.02□□□□□ -1.29
CCDC40-215ENST00000576033 SLC38A4Q969I6 547 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 CPNE4Q96A23 557 aaPredicted RBP7.02□□□□□ -1.29
CCDC40-215ENST00000576033 DDIT4LQ96D03 193 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 DTNBP1Q96EV8 351 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 ZNF385AQ96PM9 386 aaKnown RBP7.02□□□□□ -1.29
CCDC40-215ENST00000576033 ZNF587Q96SQ5 575 aaPredicted RBP7.02□□□□□ -1.29
CCDC40-215ENST00000576033 TM9SF2Q99805 663 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 GABARAPL3Q9BY60 117 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 TRIM2Q9C040 744 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 GRIP2Q9C0E4 1043 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 ARMC7Q9H6L4 198 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 TMEM27Q9HBJ8 222 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 B3GAT1Q9P2W7 334 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 MCTS1Q9ULC4 181 aaKnown RBP7.02□□□□□ -1.29
CCDC40-215ENST00000576033 HDGFL3Q9Y3E1 203 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 SAMHD1Q9Y3Z3 626 aaKnown RBP7.02□□□□□ -1.29
CCDC40-215ENST00000576033 PKDREJQ9NTG1 2253 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 TRBV4-1A0A0J9YWV2 114 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 TRAPPC13A5PLN9 417 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 A8MVM7 634 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 MITFO75030 526 aaPredicted RBP7.01□□□□□ -1.29
CCDC40-215ENST00000576033 SERPINI2O75830 405 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 AHSA1O95433 338 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 CH25HO95992 272 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 PLGP00747 810 aaPredicted RBP7.01□□□□□ -1.29
CCDC40-215ENST00000576033 IFNW1P05000 195 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 TFAP2AP05549 437 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 MAKP20794 623 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 PRKACGP22612 351 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 IGFBP5P24593 272 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 GPR4P46093 362 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 HTR3AP46098 478 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 RPS6KA3P51812 740 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 RAD23AP54725 363 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 TUBA4AP68366 448 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 H3F3AP84243 136 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 FAM27E3Q08E93 113 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 RASGEF1BQ0VAM2 473 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 KEAP1Q14145 624 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 LAPTM4AQ15012 233 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 ZSWIM7Q19AV6 140 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 MICAQ29983 383 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 C9orf135Q5VTT2 229 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 LAIR2Q6ISS4 152 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 MTFR2Q6P444 385 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 ZNF613Q6PF04 617 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 ULK3Q6PHR2 472 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 TFAP2EQ6VUC0 442 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 LINC00114Q6XXX2 140 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 FAM214BQ7L5A3 538 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 LINGO2Q7L985 606 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 GPAT4Q86UL3 456 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 PARP8Q8N3A8 854 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 GIPC3Q8TF64 312 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 SLC35B4Q969S0 331 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 GMPPAQ96IJ6 420 aaPredicted RBP7.01□□□□□ -1.29
CCDC40-215ENST00000576033 PRRC1Q96M27 445 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 ZNF426Q9BUY5 554 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 SFXN3Q9BWM7 321 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 MRPS26Q9BYN8 205 aaKnown RBP7.01□□□□□ -1.29
CCDC40-215ENST00000576033 JKAMPQ9P055 326 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 PDP1Q9P0J1 537 aaPredicted RBP7.01□□□□□ -1.29
CCDC40-215ENST00000576033 NDRG4Q9ULP0 352 aaKnown RBP7.01□□□□□ -1.29
CCDC40-215ENST00000576033 SLC9A8Q9Y2E8 581 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 MYRFQ9Y2G1 1151 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 TESMINQ9Y4I5 508 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 SPIN1Q9Y657 262 aaPredicted RBP7.01□□□□□ -1.29
CCDC40-215ENST00000576033 HSPE1-MOB4S4R3N1 261 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 U3KQV3 271 aa7.01□□□□□ -1.29
CCDC40-215ENST00000576033 TRAV36DV7A0A075B6V5 113 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 LOC100130705A0A1B0GUX0 176 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 A0A1W2PRQ8 180 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 AQP7P3A6NL99 342 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 C11orf98E9PRG8 122 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 TNFRSF11BO00300 401 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 DVL2O14641 736 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 FMO6PO60774 539 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 OR5F1O95221 314 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 CLIC3O95833 236 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 HOXD4P09016 255 aaPredicted RBP7□□□□□ -1.29
CCDC40-215ENST00000576033 FCGR2AP12318 317 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 IGFBP2P18065 325 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 AGAP20933 346 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 ALDH3B2P48448 385 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 SELENOPP49908 381 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 ASCL1P50553 236 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 ARHGDIAP52565 204 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 CTBP2P56545 445 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms