RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 ASB6Q9NWX5 421 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 LYARQ9NX58 379 aaKnown RBP7.82□□□□□ -1.16
RPAIN-215ENST00000575112 BABAM2Q9NXR7 383 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 COL6A3P12111 3177 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 F10P00742 488 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 IGF2P01344 180 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 HIST1H1CP16403 213 aaKnown RBP7.82□□□□□ -1.16
RPAIN-215ENST00000575112 NPR2P20594 1047 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 NDUFS1P28331 727 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 IL12BP29460 328 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 GNALP38405 381 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 RIN1Q13671 783 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 NDUFA9Q16795 377 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 EIPR1Q53HC9 387 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 HDDC2Q7Z4H3 204 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 TMPRSS12Q86WS5 348 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 ZNF619Q8N2I2 560 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 CHST4Q8NCG5 386 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 OR5M1Q8NGP8 315 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 MOSPD2Q8NHP6 518 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 LHFPL5Q8TAF8 219 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 GPR119Q8TDV5 335 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 PTP4A1Q93096 173 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 LINC00615Q96LM1 132 aaPredicted RBP7.82□□□□□ -1.16
RPAIN-215ENST00000575112 TIMM29Q9BSF4 260 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 GSX2Q9BZM3 304 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 TSPAN10Q9H1Z9 355 aaPredicted RBP7.82□□□□□ -1.16
RPAIN-215ENST00000575112 KCNN2Q9H2S1 579 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 CLEC4MQ9H2X3 399 aaPredicted RBP7.82□□□□□ -1.16
RPAIN-215ENST00000575112 DPAGT1Q9H3H5 408 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 TCF7L1Q9HCS4 588 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 GPR160Q9UJ42 338 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 COPS3Q9UNS2 423 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 EXOSC1Q9Y3B2 195 aaKnown RBP7.82□□□□□ -1.16
RPAIN-215ENST00000575112 SHISA8B8ZZ34 492 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 TMEM150CB9EJG8 249 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 TRIM3O75382 744 aaPredicted RBP7.82□□□□□ -1.16
RPAIN-215ENST00000575112 CBX7O95931 251 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 H2AFB2P0C5Z0 115 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 LINC00271P0C7V0 271 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 SULT1A3P0DMM9 295 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 SULT1A4P0DMN0 295 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 GBX2P52951 348 aaPredicted RBP7.82□□□□□ -1.16
RPAIN-215ENST00000575112 LRRC37A5PQ49AS3 106 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 CLLU1Q5K131 121 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 ARHGAP40Q5TG30 622 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 RNLSQ5VYX0 342 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 HBMQ6B0K9 141 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 TSSK4Q6SA08 328 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 TMED4Q7Z7H5 227 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 ZNF321PQ8N8H1 164 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 ZNRF4Q8WWF5 429 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 SLC25A28Q96A46 364 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 METTL2AQ96IZ6 378 aaKnown RBP7.82□□□□□ -1.16
RPAIN-215ENST00000575112 SERINC2Q96SA4 455 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 TEAD3Q99594 435 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 RANBP3Q9H6Z4 567 aaPredicted RBP7.82□□□□□ -1.16
RPAIN-215ENST00000575112 NTMQ9P121 344 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.82□□□□□ -1.16
RPAIN-215ENST00000575112 FKBP7Q9Y680 259 aa7.82□□□□□ -1.16
RPAIN-215ENST00000575112 MEIKINA0A087WXM9 373 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 TSPAN11A1L157 253 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 TRABD2BA6NFA1 517 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 XKRYO14609 159 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 ARPC1BO15143 372 aaKnown RBP7.81□□□□□ -1.16
RPAIN-215ENST00000575112 TMIGD3P0DMS9 266 aaPredicted RBP7.81□□□□□ -1.16
RPAIN-215ENST00000575112 CXCR1P25024 350 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 HTR2AP28223 471 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 OPCMLQ14982 345 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 FAM74A1Q5RGS3 127 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 GARNL3Q5VVW2 1013 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 CBLN3Q6UW01 205 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 LRRC69Q6ZNQ3 347 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 ZNF627Q7L945 461 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 FAM220AQ7Z4H9 259 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 LRRC28Q86X40 367 aaPredicted RBP7.81□□□□□ -1.16
RPAIN-215ENST00000575112 NSMAFQ92636 917 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 ZNF436Q9C0F3 470 aaPredicted RBP7.81□□□□□ -1.16
RPAIN-215ENST00000575112 C20orf85Q9H1P6 137 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 PIPOXQ9P0Z9 390 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 PCDHGA5Q9Y5G8 931 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 OBSL1O75147 1896 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 KIAA1549LQ6ZVL6 1849 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 TEX51A0A1B0GUA7 166 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 DCDC2BA2VCK2 349 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 FAM74A7A6NL05 159 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 ANXA2P2A6NMY6 339 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 SCDO00767 359 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 TOR1AO14656 332 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 RGS9O75916 674 aaPredicted RBP7.81□□□□□ -1.16
RPAIN-215ENST00000575112 DBIP07108 87 aaKnown RBP7.81□□□□□ -1.16
RPAIN-215ENST00000575112 RNH1P13489 461 aaKnown RBP7.81□□□□□ -1.16
RPAIN-215ENST00000575112 OR1D5P58170 312 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 SNTB2Q13425 540 aaKnown RBP7.81□□□□□ -1.16
RPAIN-215ENST00000575112 FAM53BQ14153 422 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 FAM74A3Q4VXF1 159 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 C1QL3Q5VWW1 255 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 ALKBH2Q6NS38 261 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 ZNF620Q6ZNG0 422 aa7.81□□□□□ -1.16
RPAIN-215ENST00000575112 MBOAT2Q6ZWT7 520 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms