RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 SRSF5Q13243 272 aaKnown RBP14.28□□□□□ -0.12
NUP88-207ENST00000573584 CBFBQ13951 182 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 ZNF141Q15928 474 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 Q499Y3 187 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 ZNF626Q68DY1 528 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 SLC6A19Q695T7 634 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 GPAT4Q86UL3 456 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 DNAAF1Q8NEP3 725 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 OR5AK2Q8NH90 309 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 PATE1Q8WXA2 126 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 RIT1Q92963 219 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 FAM131CQ96AQ9 280 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 WDR89Q96FK6 387 aaPredicted RBP14.28□□□□□ -0.12
NUP88-207ENST00000573584 Q96M85 177 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 TSSK2Q96PF2 358 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 CCDC3Q9BQI4 270 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 TWSG1Q9GZX9 223 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 XIRP2A4UGR9 3374 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 TMEM72A0PK05 275 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 TUBAL3A6NHL2 446 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 NDUFB6O95139 128 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 RAB38P57729 211 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 PRPS1P60891 318 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 IL10RAQ13651 578 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 TMEM196Q5HYL7 178 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 MANEAQ5SRI9 462 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 OR5M10Q6IEU7 315 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 DND1Q8IYX4 353 aaKnown RBP14.28□□□□□ -0.12
NUP88-207ENST00000573584 RBM18Q96H35 190 aaKnown RBP14.28□□□□□ -0.12
NUP88-207ENST00000573584 SPACA7Q96KW9 195 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 SFXN1Q9H9B4 322 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 HRASLS2Q9NWW9 162 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 LRIT1Q9P2V4 623 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 SNRPGP15A8MWD9 76 aa14.27□□□□□ -0.12
NUP88-207ENST00000573584 OR2A4O95047 310 aa14.27□□□□□ -0.12
NUP88-207ENST00000573584 ACSM4P0C7M7 580 aa14.27□□□□□ -0.12
NUP88-207ENST00000573584 ADRA2CP18825 462 aa14.27□□□□□ -0.12
NUP88-207ENST00000573584 ISXQ2M1V0 245 aa14.27□□□□□ -0.12
NUP88-207ENST00000573584 ITPRIPL2Q3MIP1 535 aa14.27□□□□□ -0.12
NUP88-207ENST00000573584 LIPNQ5VXI9 398 aa14.27□□□□□ -0.12
NUP88-207ENST00000573584 FAM220AQ7Z4H9 259 aa14.27□□□□□ -0.12
NUP88-207ENST00000573584 OR9A4Q8NGU2 314 aa14.27□□□□□ -0.12
NUP88-207ENST00000573584 OR4C3Q8NH37 302 aa14.27□□□□□ -0.12
NUP88-207ENST00000573584 C15orf40Q8WUR7 153 aa14.27□□□□□ -0.12
NUP88-207ENST00000573584 ADAD1Q96M93 576 aaKnown RBP14.27□□□□□ -0.12
NUP88-207ENST00000573584 VSTM2LQ96N03 204 aa14.27□□□□□ -0.12
NUP88-207ENST00000573584 OR2A7Q96R45 310 aa14.27□□□□□ -0.12
NUP88-207ENST00000573584 EFCAB7A8K855 629 aa14.27□□□□□ -0.13
NUP88-207ENST00000573584 MCRIP1C9JLW8 97 aa14.27□□□□□ -0.13
NUP88-207ENST00000573584 NPIPB9F8W1W9 429 aa14.27□□□□□ -0.13
NUP88-207ENST00000573584 IL5P05113 134 aa14.27□□□□□ -0.13
NUP88-207ENST00000573584 TMIGD3P0DMS9 266 aaPredicted RBP14.27□□□□□ -0.13
NUP88-207ENST00000573584 NHLRC1Q6VVB1 395 aa14.27□□□□□ -0.13
NUP88-207ENST00000573584 JAZF1Q86VZ6 243 aa14.27□□□□□ -0.13
NUP88-207ENST00000573584 TMPRSS12Q86WS5 348 aa14.27□□□□□ -0.13
NUP88-207ENST00000573584 NSMAFQ92636 917 aa14.27□□□□□ -0.13
NUP88-207ENST00000573584 BMFQ96LC9 184 aa14.27□□□□□ -0.13
NUP88-207ENST00000573584 C1QTNF6Q9BXI9 259 aa14.27□□□□□ -0.13
NUP88-207ENST00000573584 FRRS1LQ9P0K9 344 aa14.27□□□□□ -0.13
NUP88-207ENST00000573584 hCG_1807616A0A1W2PRN6 198 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 OR2M5A3KFT3 312 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 HCRTR1O43613 425 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 CTNSO60931 367 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 LDOC1O95751 146 aaPredicted RBP14.26□□□□□ -0.13
NUP88-207ENST00000573584 GUSBP08236 651 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 MAPK3P27361 379 aaPredicted RBP14.26□□□□□ -0.13
NUP88-207ENST00000573584 NTSR1P30989 418 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 AQP2P41181 271 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 PGDP52209 483 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 RPS4XP62701 263 aaKnown RBP14.26□□□□□ -0.13
NUP88-207ENST00000573584 ALKBH1Q13686 389 aaKnown RBP14.26□□□□□ -0.13
NUP88-207ENST00000573584 KIAA1324Q6UXG2 1013 aaKnown RBP14.26□□□□□ -0.13
NUP88-207ENST00000573584 NPSR1Q6W5P4 371 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 RNF44Q7L0R7 432 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 SLC16A9Q7RTY1 509 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 PRSS42Q7Z5A4 293 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 KCTD20Q7Z5Y7 419 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 C10orf53Q8N6V4 93 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 OR52B4Q8NGK2 314 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 C3orf49Q96BT1 292 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 UTP23Q9BRU9 249 aaKnown RBP14.26□□□□□ -0.13
NUP88-207ENST00000573584 SEMA4CQ9C0C4 833 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 Q9N2J8 555 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 MRM2Q9UI43 246 aaKnown RBP14.26□□□□□ -0.13
NUP88-207ENST00000573584 KLHDC2Q9Y2U9 406 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 ETV7Q9Y603 341 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 SERINC4A6NH21 518 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 PYCARD-AS1I3L0S3 204 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 UPK3AO75631 287 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 CDC123O75794 336 aaPredicted RBP14.26□□□□□ -0.13
NUP88-207ENST00000573584 EGFP01133 1207 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 UBL4AP11441 157 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 ITPKBP27987 946 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 SLC51BQ86UW2 128 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 G6PC3Q9BUM1 346 aa14.26□□□□□ -0.13
NUP88-207ENST00000573584 APBB3O95704 486 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 MAS1P04201 325 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 GRK6P43250 576 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 MECP2P51608 486 aaKnown RBP14.25□□□□□ -0.13
NUP88-207ENST00000573584 WBP1Q96G27 269 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms