RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 PRSS44E7EML9 344 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 H7C0C1 242 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 TGOLN2O43493 480 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 FADS1O60427 444 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 ANXA9O76027 345 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 IGSF6O95976 241 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 WNT11O96014 354 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 MELTFP08582 738 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 BCKDHAP12694 445 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 HIST1H1CP16403 213 aaKnown RBP4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 MGMTP16455 207 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 IDSP22304 550 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 RPL4P36578 427 aaKnown RBP4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 SLCO1A2P46721 670 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 FUT6P51993 359 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 AP2S1P53680 142 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 SLC35B1P78383 322 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 DHODHQ02127 395 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 POU3F1Q03052 451 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 RIPPLY1Q0D2K3 151 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 ILF3Q12906 894 aaKnown RBP eCLIP4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 SRSF6Q13247 344 aaKnown RBP4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 GPR17Q13304 367 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 DYNC1I2Q13409 638 aaKnown RBP4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 FZD5Q13467 585 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 FLOT2Q14254 428 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 SMCO1Q147U7 214 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 PTGES3Q15185 160 aaKnown RBP4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 C3AR1Q16581 482 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 PGGHGQ32M88 737 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 TMEM176BQ3YBM2 270 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 GTDC1Q4AE62 458 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 RFTN2Q52LD8 501 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 TMEM35AQ53FP2 167 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 ACSM3Q53FZ2 586 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 AWAT1Q58HT5 328 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 FGD3Q5JSP0 725 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 TEX30Q5JUR7 227 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 WASHC2DQ5SRD0 308 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 CCNJQ5T5M9 372 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 DRAM2Q6UX65 266 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 ASB18Q6ZVZ8 466 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 HSD11B1LQ7Z5J1 315 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 MYPOPQ86VE0 399 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 PLA2G4DQ86XP0 818 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 ZNF547Q8IVP9 402 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 BBS7Q8IWZ6 715 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 FAM71AQ8IYT1 594 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 CMTM1Q8IZ96 169 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 TPRX1Q8N7U7 411 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 C15orf54Q8N8G6 183 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 PRR26Q8N8Z3 221 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 RELL2Q8NC24 303 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 OR4K2Q8NGD2 314 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 OR4D9Q8NGE8 314 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 C8orf46Q8TAG6 207 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 ITFG1Q8TB96 612 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 HPSE2Q8WWQ2 592 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 NEIL2Q969S2 332 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 YIPF6Q96EC8 236 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 SERPINB12Q96P63 405 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 NIPSNAP1Q9BPW8 284 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 TRAF4Q9BUZ4 470 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 BARHL1Q9BZE3 327 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 ULBP1Q9BZM6 244 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 TRIM15Q9C019 465 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 TRABDQ9H4I3 376 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 ASB7Q9H672 318 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 AKIP1Q9NQ31 210 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 DDX19AQ9NUU7 478 aaKnown RBP4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 NLE1Q9NVX2 485 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 CLN6Q9NWW5 311 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 CMTM6Q9NX76 183 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 NYAP2Q9P242 653 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 SCML2Q9UQR0 700 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 ARL2BPQ9Y2Y0 163 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 DHRS7Q9Y394 339 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 GMPPBQ9Y5P6 360 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 ARL5AQ9Y689 179 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 ABCB11O95342 1321 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 PDS5AQ29RF7 1337 aaKnown RBP4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 ZNF532Q9HCE3 1301 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 C9orf84Q5VXU9 1444 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 TEX13DA0A0J9YY54 714 aaPredicted RBP4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 GRID2IPA4D2P6 1211 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 PRR23AA6NEV1 266 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 VSTM2BA6NLU5 285 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 FTCDNL1E5RQL4 147 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 EI24O14681 340 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 HPGDSO60760 199 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 NDUFS7O75251 213 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 SMIM24O75264 130 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 KHDRBS3O75525 346 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 CEACAM4O75871 244 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 GLSO94925 669 aaPredicted RBP4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 MED26O95402 600 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 C1orf105O95561 183 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 HLA-AP01891 365 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 CALB1P05937 261 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 UMODP07911 640 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms