RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 SULT1C3Q6IMI6 304 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 CYP2R1Q6VVX0 501 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 HACD2Q6Y1H2 254 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 RPS27LQ71UM5 84 aaKnown RBP5.9□□□□□ -1.46
CHD3-213ENST00000571249 LILRA2Q8N149 483 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 GTPBP8Q8N3Z3 284 aaPredicted RBP5.9□□□□□ -1.46
CHD3-213ENST00000571249 RNF175Q8N4F7 328 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 RNF152Q8N8N0 203 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 OR4N2Q8NGD1 307 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 FBXO30Q8TB52 745 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 RNF145Q96MT1 663 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 ANKRD27Q96NW4 1050 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 ZNF300Q96RE9 604 aaPredicted RBP5.9□□□□□ -1.46
CHD3-213ENST00000571249 PSD2Q9BQI7 771 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 EFCAB11Q9BUY7 163 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 CDADC1Q9BWV3 514 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 KRTAP4-5Q9BYR2 181 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 POFUT1Q9H488 388 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 TUBB1Q9H4B7 451 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 DCLRE1BQ9H816 532 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 BCO1Q9HAY6 547 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 MID1IP1Q9NPA3 183 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 PFDN4Q9NQP4 134 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 ZNF275Q9NSD4 429 aaPredicted RBP5.9□□□□□ -1.46
CHD3-213ENST00000571249 AP5S1Q9NUS5 200 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 NKIRAS2Q9NYR9 191 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 MAT2BQ9NZL9 334 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 CD274Q9NZQ7 290 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 KLHL9Q9P2J3 617 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 SLC7A8Q9UHI5 535 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 BAIAP2L1Q9UHR4 511 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 ZNF639Q9UID6 485 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 TET2Q6N021 2002 aaPredicted RBP5.9□□□□□ -1.47
CHD3-213ENST00000571249 IGHV3OR16-10A0A075B7F0 116 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 A0A0A6YYD5 115 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 TMEM129A0AVI4 362 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 A6NLC8 198 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 NPIPB8E9PQR5 432 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 H3BUI4 141 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 PPP6CO00743 305 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 TAPBPO15533 448 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 RGS14O43566 566 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 CT45A8P0DMV1 189 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 CT45A9P0DMV2 189 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 LBPP18428 481 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 ACHEP22303 614 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 SLC7A1P30825 629 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 MTNR1AP48039 350 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 PIK3CGP48736 1102 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 HNMTP50135 292 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 FOXG1P55316 489 aaPredicted RBP5.89□□□□□ -1.47
CHD3-213ENST00000571249 CSTF3Q12996 717 aaKnown RBP5.89□□□□□ -1.47
CHD3-213ENST00000571249 TRAF3Q13114 568 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 CYLC2Q14093 348 aaPredicted RBP5.89□□□□□ -1.47
CHD3-213ENST00000571249 GSTA3Q16772 222 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 CT45A2Q5DJT8 189 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 PAGE2BQ5JRK9 111 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 CPTPQ5TA50 214 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 C9orf135Q5VTT2 229 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 CLEC6AQ6EIG7 209 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 OR7E24Q6IFN5 339 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 C8orf82Q6P1X6 216 aaPredicted RBP5.89□□□□□ -1.47
CHD3-213ENST00000571249 CYP20A1Q6UW02 462 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 C16orf89Q6UX73 402 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 NPSR1Q6W5P4 371 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 LRRC70Q7Z2Q7 622 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 SNX32Q86XE0 403 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 CDK20Q8IZL9 346 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 PGAM4Q8N0Y7 254 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 SLC43A2Q8N370 569 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 TCAIMQ8N3R3 496 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 POU5F2Q8N7G0 328 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 CDYL2Q8N8U2 506 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 SLC16A11Q8NCK7 471 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 AGR3Q8TD06 166 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 TRPC4APQ8TEL6 797 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 TWIST2Q8WVJ9 160 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 RDH5Q92781 318 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 POP5Q969H6 163 aaKnown RBP5.89□□□□□ -1.47
CHD3-213ENST00000571249 YIPF5Q969M3 257 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 MUL1Q969V5 352 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 WDR34Q96EX3 536 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 CMTM7Q96FZ5 175 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 C3orf30Q96M34 536 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 KCNS3Q9BQ31 491 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 SLC30A2Q9BRI3 323 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 ADI1Q9BV57 179 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 CHIAQ9BZP6 476 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 SHCBP1LQ9BZQ2 653 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 CD244Q9BZW8 370 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 MS4A7Q9GZW8 240 aaPredicted RBP5.89□□□□□ -1.47
CHD3-213ENST00000571249 MRPL18Q9H0U6 180 aaKnown RBP5.89□□□□□ -1.47
CHD3-213ENST00000571249 TOR3AQ9H497 397 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 CNTD2Q9H8S5 307 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 AKTIPQ9H8T0 292 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 EFCAB1Q9HAE3 211 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 OBP2BQ9NPH6 170 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 SLC17A5Q9NRA2 495 aa5.89□□□□□ -1.47
CHD3-213ENST00000571249 SDR39U1Q9NRG7 319 aaPredicted RBP5.89□□□□□ -1.47
CHD3-213ENST00000571249 AMDHD2Q9Y303 409 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms