RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 EGLN3Q9H6Z9 239 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 INIPQ9NRY2 104 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 ASF1BQ9NVP2 202 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 KLHL9Q9P2J3 617 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 TNFRSF10DQ9UBN6 386 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 BAIAP2Q9UQB8 552 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 RASD1Q9Y272 281 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 SIGLEC7Q9Y286 467 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 HIF3AQ9Y2N7 669 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 ZNF175Q9Y473 711 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 GMPPBQ9Y5P6 360 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 EXPH5Q8NEV8 1989 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 SEC16AO15027 2179 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 IGHV3-15A0A0B4J1V0 119 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 A0A1W2PNV4 684 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 CLCA1A8K7I4 914 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 H0YC42 278 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 H0YJX3 145 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 M0R3G1 203 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 GPR171O14626 319 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 SMAD9O15198 467 aaKnown RBP5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 KLF4O43474 513 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 EFNA2O43921 213 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 SLC19A2O60779 497 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 WDR1O75083 606 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 PPP1R3DO95685 299 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 SNAP29O95721 258 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 CPN1P15169 458 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZNF16P17020 682 aaPredicted RBP5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZNF26P17031 533 aaPredicted RBP5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZNF3P17036 446 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 PAICSP22234 425 aaKnown RBP5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 UQCRC1P31930 480 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 CAPGP40121 348 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 AQP2P41181 271 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 SUCLG1P53597 346 aaKnown RBP5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 CRISP1P54107 249 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 PER3P56645 1201 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 TAGLNQ01995 201 aaKnown RBP5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 NPRL3Q12980 569 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 KRR1Q13601 381 aaKnown RBP5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 RNPS1Q15287 305 aaKnown RBP5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 PGGHGQ32M88 737 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 TTC23Q5W5X9 447 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 FAM205BPQ63HN1 556 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 GTF2IRD2BQ6EKJ0 949 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 ABLIM2Q6H8Q1 611 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 KRT80Q6KB66 452 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZNF585AQ6P3V2 769 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 DPY19L2P2Q6ZN68 376 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 GTF2IRD2Q86UP8 949 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 IGFN1Q86VF2 1251 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 SVOPQ8N4V2 548 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 IQCF1Q8N6M8 205 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 LRRC17Q8N6Y2 441 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 LSM14AQ8ND56 463 aaKnown RBP5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 MOSPD2Q8NHP6 518 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 FAM81AQ8TBF8 368 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 LIPHQ8WWY8 451 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 WDYHV1Q96HA8 205 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZNF845Q96IR2 970 aaPredicted RBP5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 ADGRG7Q96K78 797 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 SAMD8Q96LT4 415 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 GPA33Q99795 319 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 SLC29A1Q99808 456 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 APOL4Q9BPW4 351 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 TUBA1CQ9BQE3 449 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 KATNB1Q9BVA0 655 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 SRXN1Q9BYN0 137 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 TP63Q9H3D4 680 aaPredicted RBP5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 MCCC2Q9HCC0 563 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 KLHL13Q9P2N7 655 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 GRHPRQ9UBQ7 328 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 SEC14L4Q9UDX3 406 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 IL20RAQ9UHF4 553 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 TMEFF2Q9UIK5 374 aaPredicted RBP5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 NOX1Q9Y5S8 564 aa5.89□□□□□ -1.47
CTDNEP1-204ENST00000570484 FRYQ5TBA9 3013 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 CCDC88CQ9P219 2028 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 TEX13CA0A0J9YWL9 993 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 A6NIZ1 184 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 AHRRA9YTQ3 701 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 PLPP3O14495 311 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 MPZL2O60487 215 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 FZD7O75084 574 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 BCL10O95999 233 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 GHRHP01286 108 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 HMGN1P05114 100 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 F13BP05160 661 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 CD14P08571 375 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 SDHAP31040 664 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 GRK5P34947 590 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 TDGF1P3P51864 188 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 AGFG1P52594 562 aaKnown RBP5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 MLLT10P55197 1068 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 CTXN1P60606 82 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 RAP1BP61224 184 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 RAP1AP62834 184 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 ERVK-25P63136 954 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 MYBPC1Q00872 1141 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms