RNA–Protein interactions for RNA: ENST00000569768.1

THUMPD1-204, Transcript of THUMP domain containing 1, humanhuman

TSL 2

Gene THUMPD1, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-204ENST00000569768 UBAP1Q9NZ09 502 aa13.21□□□□□ -0.29
THUMPD1-204ENST00000569768 B3GAT1Q9P2W7 334 aa13.21□□□□□ -0.29
THUMPD1-204ENST00000569768 SPRR3Q9UBC9 169 aa13.21□□□□□ -0.29
THUMPD1-204ENST00000569768 SEC14L4Q9UDX3 406 aa13.21□□□□□ -0.29
THUMPD1-204ENST00000569768 FRYQ5TBA9 3013 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 A0A1W2PRG6 482 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 CENPBD1B2RD01 187 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 NPIPA5E9PKD4 350 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 RNF13O43567 381 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 CXCL13O43927 109 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 PPP1R3DO95685 299 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 OPN1LWP04000 364 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 CCDC159P0C7I6 412 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 SLC16A1P53985 500 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 RPL27P61353 136 aaKnown RBP13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 KLRB1Q12918 225 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 TOP3AQ13472 1001 aaPredicted RBP13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 SNAPC1Q16533 368 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 UGT2A3Q6UWM9 527 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 PTCHD4Q6ZW05 846 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 ADGRE4PQ86SQ3 457 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 ADCK1Q86TW2 530 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 GHDCQ8N2G8 530 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 EXD3Q8N9H8 876 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 ZPLD1Q8TCW7 415 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 HDAC2Q92769 488 aaKnown RBP13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 CRELD1Q96HD1 420 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 PLEKHA8Q96JA3 519 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 ERMAPQ96PL5 475 aaPredicted RBP13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 SRXN1Q9BYN0 137 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 ZNF71Q9NQZ8 489 aaPredicted RBP13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 PLCXD1Q9NUJ7 323 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 IL20RAQ9UHF4 553 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 NPIPA1Q9UND3 350 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 ZNF175Q9Y473 711 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 IER3IP1Q9Y5U9 82 aa13.2□□□□□ -0.3
THUMPD1-204ENST00000569768 CHD8Q9HCK8 2581 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 A6NIZ1 184 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 RIIAD1A6NNX1 92 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 SMAD9O15198 467 aaKnown RBP13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 AHCYL1O43865 530 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 CYTIPO60759 359 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 WBP4O75554 376 aaKnown RBP13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 F13BP05160 661 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 ZNF3P17036 446 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 NOS3P29474 1203 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 EIF1AXP47813 144 aaKnown RBP13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 RAP1BP61224 184 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 RAP1AP62834 184 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 HSF1Q00613 529 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 CDK5R2Q13319 367 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 SF3B4Q15427 424 aaKnown RBP eCLIP13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 ACKR1Q16570 336 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 GXYLT1Q4G148 440 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 RBM48Q5RL73 367 aaKnown RBP13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 C6orf141Q5SZD1 244 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 ZNF362Q5T0B9 420 aaPredicted RBP13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 TMEM225Q6GV28 225 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 LSRQ86X29 649 aaPredicted RBP13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 UEVLDQ8IX04 471 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 UBQLNLQ8IYU4 475 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 ARIH2OSQ8N7S6 290 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 TEX19Q8NA77 164 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 ZNF519Q8TB69 540 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 APH1BQ8WW43 257 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 ADAD1Q96M93 576 aaKnown RBP13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 TSPAN32Q96QS1 320 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 UCN2Q96RP3 112 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 DDOQ99489 341 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 RNF122Q9H9V4 155 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 GP6Q9HCN6 339 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 GRHPRQ9UBQ7 328 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 MCTS1Q9ULC4 181 aaKnown RBP13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 DMXL2Q8TDJ6 3036 aa13.19□□□□□ -0.3
THUMPD1-204ENST00000569768 IGKV3D-15A0A087WSY6 115 aa13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 TRIM64A6NGJ6 449 aa13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 SNTNA6NMZ2 147 aa13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 KDM4EB2RXH2 506 aaPredicted RBP13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 ZNF814B7Z6K7 855 aa13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 C11orf98E9PRG8 122 aa13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 H0YC42 278 aa13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 TRAF3IP2O43734 574 aaPredicted RBP13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 AKAP8O43823 692 aaKnown RBP13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 PRKYO43930 277 aa13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 SYNGR4O95473 234 aa13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 FCGR2AP12318 317 aa13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 ZNF43P17038 809 aa13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 PAICSP22234 425 aaKnown RBP13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 AHCYP23526 432 aa13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 TDGF1P3P51864 188 aa13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 CHN2P52757 468 aa13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 ERVK-25P63136 954 aa13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 TMED1Q13445 227 aa13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 KRR1Q13601 381 aaKnown RBP13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 SLC17A1Q14916 467 aa13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 ARMC4Q5T2S8 1044 aa13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 AADACL4Q5VUY2 407 aa13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 NXNL2Q5VZ03 156 aa13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 LAIR2Q6ISS4 152 aa13.18□□□□□ -0.3
THUMPD1-204ENST00000569768 SLC35D2Q76EJ3 337 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms