RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 PGAM4Q8N0Y7 254 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 C1orf162Q8NEQ5 155 aaPredicted RBP12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 FAM162AQ96A26 154 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 HS6ST2Q96MM7 605 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 LINC00470Q9BZP3 86 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 FKRPQ9H9S5 495 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 NANSQ9NR45 359 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 ADAM21Q9UKJ8 722 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 NOX1Q9Y5S8 564 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 AKAP9Q99996 3911 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 ZNF587BE7ETH6 402 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 KPNA4O00629 521 aaPredicted RBP12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 TRAF3IP2O43734 574 aaPredicted RBP12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 SLC43A1O75387 559 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 GMNNO75496 209 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 UPK3AO75631 287 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 OR6A2O95222 327 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 ATE1O95260 518 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 HPRP00739 348 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 IGF2P01344 180 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 MT-ND1P03886 318 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 HIST1H2ABP04908 130 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 IFNW1P05000 195 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 CD3EP07766 207 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 ADORA3P0DMS8 318 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 HLA-DOBP13765 273 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 NCK1P16333 377 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 AHCYP23526 432 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 MNAT1P51948 309 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 ART1P52961 327 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 SLC25A3Q00325 362 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 KRT72Q14CN4 511 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 TESK1Q15569 626 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 ACKR1Q16570 336 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 IFI44LQ53G44 452 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 C1QTNF12Q5T7M4 302 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 SEZ6L2Q6UXD5 910 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 ZNF704Q6ZNC4 412 aaPredicted RBP12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 FKBP9P1Q75LS8 142 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 HIST3H2AQ7L7L0 130 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 C17orf78Q8N4C9 275 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 FITM2Q8N6M3 262 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 OR52N5Q8NH56 324 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 TMEM239Q8WW34 195 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 GEMIN6Q8WXD5 167 aaKnown RBP12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 HIST1H2ACQ93077 130 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 MBD6Q96DN6 1003 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 BOD1Q96IK1 185 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 PRRC1Q96M27 445 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 FOXC2Q99958 501 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 TMEM204Q9BSN7 226 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 UBTD1Q9HAC8 227 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 MEPEQ9NQ76 525 aaPredicted RBP12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 NDE1Q9NXR1 346 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 EGFL7Q9UHF1 273 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 ZNF229Q9UJW7 825 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 RPS6KA6Q9UK32 745 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 A4GNTQ9UNA3 340 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 SLC25A15Q9Y619 301 aa12.14□□□□□ -0.47
HERPUD1-218ENST00000569569 DPRXA6NFQ7 191 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 RPL36A-HNRNPH2H7BZ11 118 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 PLAUP00749 431 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 UMPSP11172 480 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 HSD17B1P14061 328 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 CD53P19397 219 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 MXRA7P84157 204 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 POU3F1Q03052 451 aaPredicted RBP12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 LGALS3BPQ08380 585 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 ZP4Q12836 540 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 SAMD4BQ5PRF9 694 aaKnown RBP12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 HMBOX1Q6NT76 420 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 C16orf89Q6UX73 402 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 NHLRC1Q6VVB1 395 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 C20orf204Q6ZNR8 217 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 LRRC17Q8N6Y2 441 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 RNF148Q8N7C7 305 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 CCDC197Q8NCU1 140 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 PIK3C3Q8NEB9 887 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 ANKK1Q8NFD2 765 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 TMEM255BQ8WV15 326 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 HSH2DQ96JZ2 352 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 CDRT15Q96T59 188 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 SLC17A5Q9NRA2 495 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 TAS2R5Q9NYW4 299 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 AMDHD2Q9Y303 409 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 MED31Q9Y3C7 131 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 RNF115Q9Y4L5 304 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 SNX13Q9Y5W8 968 aa12.13□□□□□ -0.47
HERPUD1-218ENST00000569569 A0A1W2PR80 420 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 SLC35F4A4IF30 521 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 HTR3EA5X5Y0 456 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 ZNF726A6NNF4 738 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 C11orf98E9PRG8 122 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 ASAH2BP0C7U1 165 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 CDH2P19022 906 aaPredicted RBP12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 FUT1P19526 365 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 HOXC12P31275 282 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 YAP1P46937 504 aaKnown RBP12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 UGT2B15P54855 530 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 BSPH1Q075Z2 132 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms