RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 SLC2A5P22732 501 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 CAPZBP47756 277 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 AGFG1P52594 562 aaKnown RBP8□□□□□ -1.13
LINC00558-201ENST00000569422 CTXN1P60606 82 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 RPP30P78346 268 aaKnown RBP8□□□□□ -1.13
LINC00558-201ENST00000569422 GAS6Q14393 721 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 GPR176Q14439 515 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 BCL2L15Q5TBC7 163 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 ZNF595Q8IYB9 648 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 ABCA7Q8IZY2 2146 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 OR56B2PQ8NGI1 322 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 OR8K3Q8NH51 312 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 RFT1Q96AA3 541 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 C3orf49Q96BT1 292 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 SLC25A36Q96CQ1 311 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 DERL3Q96Q80 235 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 PDE7BQ9NP56 450 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 NANSQ9NR45 359 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 CHRNA9Q9UGM1 479 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 FBXL21Q9UKT6 434 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 DMDP11532 3685 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 RHPN2P1A8MT19 583 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 TMEM150CB9EJG8 249 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 SCDO00767 359 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 RAD1O60671 282 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 SRPX2O60687 465 aaPredicted RBP8□□□□□ -1.13
LINC00558-201ENST00000569422 SPI1P17947 270 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 ATF1P18846 271 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 CD38P28907 300 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 RPS5P46782 204 aaKnown RBP8□□□□□ -1.13
LINC00558-201ENST00000569422 PITPNBP48739 271 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 FNTBP49356 437 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 GPR143P51810 404 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 SIRPAP78324 504 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 EXOSC6Q5RKV6 272 aaKnown RBP8□□□□□ -1.13
LINC00558-201ENST00000569422 OR5M10Q6IEU7 315 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 TCTN2Q96GX1 697 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 A0A087WUJ7 227 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 TMEM72A0PK05 275 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 HCRTR2O43614 444 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 OR2B3O76000 313 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 OPN1MWP04001 364 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 SYPP08247 313 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 OR8G3PP0DMU2 310 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 OPN1MW2P0DN77 364 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 OPN1MW3P0DN78 364 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 PTHLHP12272 177 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 AHCYP23526 432 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 DDOSTP39656 456 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 CDKN2AP42771 156 aaKnown RBP7.99□□□□□ -1.13
LINC00558-201ENST00000569422 OR1D5P58170 312 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 SKP1P63208 163 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 ELOCQ15369 112 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 C1orf185Q5T7R7 199 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 KANSL1Q7Z3B3 1105 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 NOXA1Q86UR1 476 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 LRRC28Q86X40 367 aaPredicted RBP7.99□□□□□ -1.13
LINC00558-201ENST00000569422 CDH26Q8IXH8 852 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 BEST4Q8NFU0 473 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 THAP3Q8WTV1 239 aaPredicted RBP7.99□□□□□ -1.13
LINC00558-201ENST00000569422 PIGKQ92643 395 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 TMEM68Q96MH6 324 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 NKX3-1Q99801 234 aaPredicted RBP7.99□□□□□ -1.13
LINC00558-201ENST00000569422 FOXQ1Q9C009 403 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 OR2B2Q9GZK3 357 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 TSPAN10Q9H1Z9 355 aaPredicted RBP7.99□□□□□ -1.13
LINC00558-201ENST00000569422 KLHL9Q9P2J3 617 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 IKZF2Q9UKS7 526 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 CLDN16Q9Y5I7 305 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 ANKRD34BA5PLL1 514 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 C2orf72A6NCS6 295 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 MEN1O00255 615 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 FLRT2O43155 660 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 NSA2O95478 260 aaKnown RBP7.99□□□□□ -1.13
LINC00558-201ENST00000569422 CRYZL1O95825 349 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 THBS2P35442 1172 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 NRG3P56975 720 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 DGCR2P98153 550 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 RPL6Q02878 288 aaKnown RBP7.99□□□□□ -1.13
LINC00558-201ENST00000569422 GRM7Q14831 915 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 SF3A2Q15428 464 aaKnown RBP7.99□□□□□ -1.13
LINC00558-201ENST00000569422 TOMM34Q15785 309 aaPredicted RBP7.99□□□□□ -1.13
LINC00558-201ENST00000569422 C1QL3Q5VWW1 255 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 DMKNQ6E0U4 476 aaPredicted RBP7.99□□□□□ -1.13
LINC00558-201ENST00000569422 NPEPL1Q8NDH3 523 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 PMEPA1Q969W9 287 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 KIAA1143Q96AT1 154 aaPredicted RBP7.99□□□□□ -1.13
LINC00558-201ENST00000569422 KTI12Q96EK9 354 aaPredicted RBP7.99□□□□□ -1.13
LINC00558-201ENST00000569422 SOSTQ9BQB4 213 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 RTN4RQ9BZR6 473 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 NOX4Q9NPH5 578 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 NUDT15Q9NV35 164 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 MRPL39Q9NYK5 338 aaKnown RBP7.99□□□□□ -1.13
LINC00558-201ENST00000569422 NPAP1Q9NZP6 1156 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 NCDNQ9UBB6 729 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 PLCL2Q9UPR0 1127 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 CACNG2Q9Y698 323 aa7.99□□□□□ -1.13
LINC00558-201ENST00000569422 IGHV1OR15-9A0A0B4J2B8 117 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 B9A039 149 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms