RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 NOX1Q9Y5S8 564 aa11.32□□□□□ -0.6
CDT1-203ENST00000569140 ZNF587BE7ETH6 402 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 MS4A18H0YCH9 400 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 PLPP3O14495 311 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 FFAR1O14842 300 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 SLC43A1O75387 559 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 HLA-DOBP13765 273 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 PPP3CBP16298 524 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 RHCEP18577 417 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 FUT1P19526 365 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 FUT4P22083 530 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 HOXC12P31275 282 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 TRIM25Q14258 630 aaKnown RBP11.31□□□□□ -0.6
CDT1-203ENST00000569140 MELKQ14680 651 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 FXNQ16595 210 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 MS4A18Q3C1V0 323 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 SLC46A3Q7Z3Q1 461 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 ABHD12BQ7Z5M8 362 aaPredicted RBP11.31□□□□□ -0.6
CDT1-203ENST00000569140 ZDHHC21Q8IVQ6 265 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 NRMQ8IXM6 262 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 CDK20Q8IZL9 346 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 GPR137CQ8N3F9 429 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 POMGNT2Q8NAT1 580 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 BPIFA2Q96DR5 249 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 PIP5K1AQ99755 562 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 BTBD10Q9BSF8 475 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 EMC6Q9BV81 110 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 CLEC4MQ9H2X3 399 aaPredicted RBP11.31□□□□□ -0.6
CDT1-203ENST00000569140 NMNAT1Q9HAN9 279 aaPredicted RBP11.31□□□□□ -0.6
CDT1-203ENST00000569140 MAN2C1Q9NTJ4 1040 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 TAS2R16Q9NYV7 291 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 NDUFAF4Q9P032 175 aa11.31□□□□□ -0.6
CDT1-203ENST00000569140 ZNF726A6NNF4 738 aa11.3□□□□□ -0.6
CDT1-203ENST00000569140 EFCAB9A8MZ26 197 aa11.3□□□□□ -0.6
CDT1-203ENST00000569140 MCIDASD6RGH6 385 aa11.3□□□□□ -0.6
CDT1-203ENST00000569140 TRAF3IP2O43734 574 aaPredicted RBP11.3□□□□□ -0.6
CDT1-203ENST00000569140 DNAJC8O75937 253 aaPredicted RBP11.3□□□□□ -0.6
CDT1-203ENST00000569140 CNOT4O95628 575 aaKnown RBP11.3□□□□□ -0.6
CDT1-203ENST00000569140 F13BP05160 661 aa11.3□□□□□ -0.6
CDT1-203ENST00000569140 IFNGR1P15260 489 aa11.3□□□□□ -0.6
CDT1-203ENST00000569140 GPR4P46093 362 aa11.3□□□□□ -0.6
CDT1-203ENST00000569140 PCYT1AP49585 367 aa11.3□□□□□ -0.6
CDT1-203ENST00000569140 BIDP55957 195 aa11.3□□□□□ -0.6
CDT1-203ENST00000569140 BNIP1Q12981 228 aa11.3□□□□□ -0.6
CDT1-203ENST00000569140 CAMK2DQ13557 499 aa11.3□□□□□ -0.6
CDT1-203ENST00000569140 MTX3Q5HYI7 312 aa11.3□□□□□ -0.6
CDT1-203ENST00000569140 HMBOX1Q6NT76 420 aa11.3□□□□□ -0.6
CDT1-203ENST00000569140 TBPL2Q6SJ96 375 aa11.3□□□□□ -0.6
CDT1-203ENST00000569140 ZNF433Q8N7K0 673 aaPredicted RBP11.3□□□□□ -0.6
CDT1-203ENST00000569140 ANKK1Q8NFD2 765 aa11.3□□□□□ -0.6
CDT1-203ENST00000569140 OR6N1Q8NGY5 312 aa11.3□□□□□ -0.6
CDT1-203ENST00000569140 OR52N5Q8NH56 324 aa11.3□□□□□ -0.6
CDT1-203ENST00000569140 ACOT11Q8WXI4 607 aaPredicted RBP11.3□□□□□ -0.6
CDT1-203ENST00000569140 MUCL1Q96DR8 90 aa11.3□□□□□ -0.6
CDT1-203ENST00000569140 ASB9Q96DX5 294 aa11.3□□□□□ -0.6
CDT1-203ENST00000569140 TXNDC15Q96J42 360 aa11.3□□□□□ -0.6
CDT1-203ENST00000569140 KRCC1Q9NPI7 259 aaPredicted RBP11.3□□□□□ -0.6
CDT1-203ENST00000569140 MALT1Q9UDY8 824 aa11.3□□□□□ -0.6
CDT1-203ENST00000569140 RCE1Q9Y256 329 aa11.3□□□□□ -0.6
CDT1-203ENST00000569140 A0A087WUU8 490 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 A0A1W2PR80 420 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 A0A1W2PRG6 482 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 SLC35F4A4IF30 521 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 OR6C65A6NJZ3 312 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 M0R3G1 203 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 FZD7O75084 574 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 UPK3AO75631 287 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 CTAG2O75638 210 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 GADD45GO95257 159 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 ITGA5P08648 1049 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 ASAH2BP0C7U1 165 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 COX5AP20674 150 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 CRYGSP22914 178 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 RRM2P31350 389 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 AQP2P41181 271 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 RASSF2P50749 326 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 FOXG1P55316 489 aaPredicted RBP11.29□□□□□ -0.6
CDT1-203ENST00000569140 SMIM11AP58511 58 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 KRTAP10-9P60411 292 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 LSM11P83369 360 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDT1-203ENST00000569140 CBX1P83916 185 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 MS4A2Q01362 244 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 ROR2Q01974 943 aaKnown RBP11.29□□□□□ -0.6
CDT1-203ENST00000569140 TGFBR3Q03167 851 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 CHRNB3Q05901 458 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 RPL18Q07020 188 aaKnown RBP11.29□□□□□ -0.6
CDT1-203ENST00000569140 TOP3AQ13472 1001 aaPredicted RBP11.29□□□□□ -0.6
CDT1-203ENST00000569140 FAM98BQ52LJ0 330 aaKnown RBP11.29□□□□□ -0.6
CDT1-203ENST00000569140 LCN8Q6JVE9 175 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 PODNL1Q6PEZ8 512 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 KLHL24Q6TFL4 600 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 MBOAT2Q6ZWT7 520 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 SLC35D2Q76EJ3 337 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 TSEN54Q7Z6J9 526 aaKnown RBP11.29□□□□□ -0.6
CDT1-203ENST00000569140 PXKQ7Z7A4 578 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 PIK3C3Q8NEB9 887 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 SLC7A6OSQ96CW6 309 aaPredicted RBP11.29□□□□□ -0.6
CDT1-203ENST00000569140 C7orf34Q96L11 122 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 OR2M2Q96R28 347 aa11.29□□□□□ -0.6
CDT1-203ENST00000569140 OR10A4Q9H209 315 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms