RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	HIF3A	Q9Y2N7	669 aa		13.26	□□□□□ -0.29
KLHDC4-223	ENST00000568499	TRAV27	A0A087WT01	109 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	OR6C65	A6NJZ3	312 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	ZNF726	A6NNF4	738 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	ZNF814	B7Z6K7	855 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499		H3BNX3	289 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	RAMP1	O60894	148 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	SMNDC1	O75940	238 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	NDUFB2	O95178	105 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	ADA	P00813	363 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	GAST	P01350	101 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	KLK2	P20151	261 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	RPL4	P36578	427 aa	Known RBP	13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	AQP2	P41181	271 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	KIR2DL2	P43627	348 aa	Predicted RBP	13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	DAP3	P51398	398 aa	Known RBP	13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	IST1	P53990	364 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	ADORA2A-AS1	P86434	159 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	POU3F1	Q03052	451 aa	Predicted RBP	13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	RPL18	Q07020	188 aa	Known RBP	13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	FOXF2	Q12947	444 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	CREB3L2	Q70SY1	520 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	MEX3D	Q86XN8	651 aa	Known RBP	13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	NAXE	Q8NCW5	288 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	ICA1L	Q8NDH6	482 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	OR13C2	Q8NGS9	318 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	TMEM45B	Q96B21	275 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	TNFRSF13C	Q96RJ3	184 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	FEV	Q99581	238 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	OSBPL10	Q9BXB5	764 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	DGCR6L	Q9BY27	220 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	SEMA6A	Q9H2E6	1030 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	NTN4	Q9HB63	628 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	TAS2R5	Q9NYW4	299 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	STX18	Q9P2W9	335 aa	Known RBP	13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	FLVCR1	Q9Y5Y0	555 aa		13.25	□□□□□ -0.29
KLHDC4-223	ENST00000568499	MCIDAS	D6RGH6	385 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	CDC42EP2	O14613	210 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	ZG16	O60844	167 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	SERPINI2	O75830	405 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	TNFSF13	O75888	250 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	BCL10	O95999	233 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	CD8B	P10966	210 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	POU2F1	P14859	743 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	UQCRC1	P31930	480 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	GSS	P48637	474 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	CLDN17	P56750	224 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	RPS4X	P62701	263 aa	Known RBP	13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	LAPTM4A	Q15012	233 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	GUSBP1	Q15486	140 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	ZNF770	Q6IQ21	691 aa	Predicted RBP	13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	SMARCD3	Q6STE5	483 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	CASP12	Q6UXS9	341 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	AAED1	Q7RTV5	226 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	PQLC1	Q8N2U9	271 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	OR52L1	Q8NGH7	329 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	LILRB4	Q8NHJ6	448 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	FANK1	Q8TC84	345 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	GTPBP3	Q969Y2	492 aa	Known RBP	13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	APH1A	Q96BI3	265 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	ZNF775	Q96BV0	537 aa	Predicted RBP	13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	STARD4	Q96DR4	205 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	ADAD1	Q96M93	576 aa	Known RBP	13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	PKP2	Q99959	881 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	UCK2	Q9BZX2	261 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	C12orf49	Q9H741	205 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	KCNJ16	Q9NPI9	418 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	PLSCR4	Q9NRQ2	329 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	RCE1	Q9Y256	329 aa		13.24	□□□□□ -0.29
KLHDC4-223	ENST00000568499	EEF1E1-BLOC1S5	C9J1V9	151 aa		13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	MSTN	O14793	375 aa		13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	EEF1E1	O43324	174 aa	Known RBP	13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	KLF4	O43474	513 aa		13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	PTP4A3	O75365	173 aa		13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	KRT33A	O76009	404 aa		13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	HPR	P00739	348 aa		13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	F13B	P05160	661 aa		13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	TSPAN19	P0C672	248 aa		13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	IFNGR1	P15260	489 aa		13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	SLC6A6	P31641	620 aa		13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	CTXN1	P60606	82 aa		13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	ELF3	P78545	371 aa	Predicted RBP	13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	NIPAL3	Q6P499	406 aa		13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	RASSF6	Q6ZTQ3	369 aa		13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	SLC35D2	Q76EJ3	337 aa		13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	BTLA	Q7Z6A9	289 aa		13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	LSR	Q86X29	649 aa	Predicted RBP	13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	EPHX4	Q8IUS5	362 aa		13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	MOSPD2	Q8NHP6	518 aa		13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	SSC4D	Q8WTU2	575 aa		13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	DCLRE1B	Q9H816	532 aa		13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	B3GAT1	Q9P2W7	334 aa		13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	ENOPH1	Q9UHY7	261 aa		13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	ING1	Q9UK53	422 aa	Predicted RBP	13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	SIGLEC7	Q9Y286	467 aa		13.23	□□□□□ -0.29
KLHDC4-223	ENST00000568499	NPIPB13	A6NJU9	1138 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	NPIPB4	C9JG80	1138 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	SLC43A1	O75387	559 aa		13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms