RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 MCUR1Q96AQ8 359 aa12.66□□□□□ -0.38
CMTM3-215ENST00000568477 TRAF4Q9BUZ4 470 aaPredicted RBP12.66□□□□□ -0.38
CMTM3-215ENST00000568477 PRR14Q9BWN1 585 aa12.66□□□□□ -0.38
CMTM3-215ENST00000568477 C1QTNF6Q9BXI9 259 aa12.66□□□□□ -0.38
CMTM3-215ENST00000568477 A0A0B4J2E0 115 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 A0A1B0GX12 115 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 M0R082 166 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 MFN2O95140 757 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 LY6G6DO95868 133 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 WNT11O96014 354 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 ZNF43P17038 809 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 GRPRP30550 384 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 CLDN17P56750 224 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 SLC25A3Q00325 362 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 SPOCK1Q08629 439 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 C1DQ13901 141 aaKnown RBP12.65□□□□□ -0.38
CMTM3-215ENST00000568477 SELPLGQ14242 412 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 MFSD13AQ14CX5 517 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 OR1Q1Q15612 314 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 AGAP6Q5VW22 663 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 NET1Q7Z628 596 aaPredicted RBP12.65□□□□□ -0.38
CMTM3-215ENST00000568477 SNX32Q86XE0 403 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 SLC30A8Q8IWU4 369 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 KDM8Q8N371 416 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 POU5F2Q8N7G0 328 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 SMYD1Q8NB12 490 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 ZNF417Q8TAU3 575 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 TAAR8Q969N4 342 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 OXGR1Q96P68 337 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 ALKBH3Q96Q83 286 aaPredicted RBP12.65□□□□□ -0.38
CMTM3-215ENST00000568477 ZNF587Q96SQ5 575 aaPredicted RBP12.65□□□□□ -0.38
CMTM3-215ENST00000568477 EPYCQ99645 322 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 DHRS9Q9BPW9 319 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 GRIP2Q9C0E4 1043 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 NDE1Q9NXR1 346 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 SEC14L4Q9UDX3 406 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 RCE1Q9Y256 329 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 B3GALT5Q9Y2C3 310 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 FN1P02751 2386 aaKnown RBP12.65□□□□□ -0.38
CMTM3-215ENST00000568477 ZANQ9Y493 2812 aa12.65□□□□□ -0.38
CMTM3-215ENST00000568477 A0A087WUJ7 227 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 LOC100653049A0A140TA62 436 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 E7EQL1 145 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 AKAP8O43823 692 aaKnown RBP12.64□□□□□ -0.39
CMTM3-215ENST00000568477 KRT34O76011 436 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 LGI1O95970 557 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 CD8AP01732 235 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 HOXB4P17483 251 aaPredicted RBP12.64□□□□□ -0.39
CMTM3-215ENST00000568477 IL1RL1Q01638 556 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 LGALS3BPQ08380 585 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 VEZF1Q14119 521 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 CLEC12BQ2HXU8 276 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 KRTAP21-3Q3LHN1 58 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 TBRG1Q3YBR2 411 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 HIKESHIQ53FT3 197 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 SWT1Q5T5J6 900 aaKnown RBP12.64□□□□□ -0.39
CMTM3-215ENST00000568477 PATL1Q86TB9 770 aaKnown RBP12.64□□□□□ -0.39
CMTM3-215ENST00000568477 ADPRHL1Q8NDY3 354 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 OR1K1Q8NGR3 316 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 OR6S1Q8NH40 331 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 BOD1Q96IK1 185 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 HS6ST2Q96MM7 605 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 LINC00470Q9BZP3 86 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 KAT8Q9H7Z6 458 aaKnown RBP12.64□□□□□ -0.39
CMTM3-215ENST00000568477 FKRPQ9H9S5 495 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 EFCAB1Q9HAE3 211 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 OBP2BQ9NPH6 170 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 B3GAT1Q9P2W7 334 aa12.64□□□□□ -0.39
CMTM3-215ENST00000568477 HEATR1Q9H583 2144 aaKnown RBP12.64□□□□□ -0.39
CMTM3-215ENST00000568477 JMJD1CQ15652 2540 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 M0QX08 132 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 M0R3H8 397 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 TPST2O60704 377 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 FMO6PO60774 539 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 SLC43A1O75387 559 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 UPK3AO75631 287 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 OPN1SWP03999 348 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 C8BP07358 591 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 PTNP21246 168 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 CBLP22681 906 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 TTKP33981 857 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 PCGF2P35227 344 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 SH3BGRP55822 239 aaPredicted RBP12.63□□□□□ -0.39
CMTM3-215ENST00000568477 UBE2NP61088 152 aaKnown RBP12.63□□□□□ -0.39
CMTM3-215ENST00000568477 TRMT5Q32P41 509 aaKnown RBP12.63□□□□□ -0.39
CMTM3-215ENST00000568477 INTS11Q5TA45 600 aaKnown RBP12.63□□□□□ -0.39
CMTM3-215ENST00000568477 HMBOX1Q6NT76 420 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 C16orf89Q6UX73 402 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 B3GLCTQ6Y288 498 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 H1FNTQ75WM6 255 aaPredicted RBP12.63□□□□□ -0.39
CMTM3-215ENST00000568477 FBXL14Q8N1E6 418 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 MCHR1Q99705 422 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 ARHGDIGQ99819 225 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 WFDC6Q9BQY6 131 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 ASPNQ9BXN1 380 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 BARX1Q9HBU1 254 aaPredicted RBP12.63□□□□□ -0.39
CMTM3-215ENST00000568477 CORINQ9Y5Q5 1042 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 ATP23Q9Y6H3 246 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 ALPK2Q86TB3 2170 aa12.63□□□□□ -0.39
CMTM3-215ENST00000568477 ABCA2Q9BZC7 2435 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms