RNA–Protein interactions for RNA: ENST00000567934.5

CDH11-213, Transcript of cadherin 11, humanhuman

TSL 2

Gene CDH11, Length 1,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-213ENST00000567934 HMBOX1Q6NT76 420 aa13.8□□□□□ -0.2
CDH11-213ENST00000567934 KLHL24Q6TFL4 600 aa13.8□□□□□ -0.2
CDH11-213ENST00000567934 PAMR1Q6UXH9 720 aa13.8□□□□□ -0.2
CDH11-213ENST00000567934 SSX8Q7RTT4 187 aa13.8□□□□□ -0.2
CDH11-213ENST00000567934 DEFB107AQ8IZN7 70 aa13.8□□□□□ -0.2
CDH11-213ENST00000567934 GPR137CQ8N3F9 429 aa13.8□□□□□ -0.2
CDH11-213ENST00000567934 FITM2Q8N6M3 262 aa13.8□□□□□ -0.2
CDH11-213ENST00000567934 TMEM255BQ8WV15 326 aa13.8□□□□□ -0.2
CDH11-213ENST00000567934 TMEM239Q8WW34 195 aa13.8□□□□□ -0.2
CDH11-213ENST00000567934 NINJ1Q92982 152 aa13.8□□□□□ -0.2
CDH11-213ENST00000567934 NSL1Q96IY1 281 aa13.8□□□□□ -0.2
CDH11-213ENST00000567934 HSH2DQ96JZ2 352 aa13.8□□□□□ -0.2
CDH11-213ENST00000567934 PRRC1Q96M27 445 aa13.8□□□□□ -0.2
CDH11-213ENST00000567934 HS6ST2Q96MM7 605 aa13.8□□□□□ -0.2
CDH11-213ENST00000567934 PRSS27Q9BQR3 290 aa13.8□□□□□ -0.2
CDH11-213ENST00000567934 AMBRA1Q9C0C7 1298 aa13.8□□□□□ -0.2
CDH11-213ENST00000567934 FKRPQ9H9S5 495 aa13.8□□□□□ -0.2
CDH11-213ENST00000567934 B3GAT1Q9P2W7 334 aa13.8□□□□□ -0.2
CDH11-213ENST00000567934 MED31Q9Y3C7 131 aa13.8□□□□□ -0.2
CDH11-213ENST00000567934 NOX1Q9Y5S8 564 aa13.8□□□□□ -0.2
CDH11-213ENST00000567934 ALPK2Q86TB3 2170 aa13.8□□□□□ -0.2
CDH11-213ENST00000567934 POLQO75417 2590 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 LOC102725191A0A1B0GVB3 256 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 A0A1W2PPR1 153 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 B2RBV5 119 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 PLPP3O14495 311 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 CLOCKO15516 846 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 UPK3AO75631 287 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 MT-ND1P03886 318 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 RBM34P42696 430 aaKnown RBP13.79□□□□□ -0.2
CDH11-213ENST00000567934 ART1P52961 327 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 LGALS3BPQ08380 585 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 KRT72Q14CN4 511 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 GABRA6Q16445 453 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 ZNF704Q6ZNC4 412 aaPredicted RBP13.79□□□□□ -0.2
CDH11-213ENST00000567934 NANOGNBQ7Z5D8 188 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 CYP4Z1Q86W10 505 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 LRRC17Q8N6Y2 441 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 FAM156AQ8NDB6 213 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 PIK3C3Q8NEB9 887 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 SGTBQ96EQ0 304 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 MUS81Q96NY9 551 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 ALKBH3Q96Q83 286 aaPredicted RBP13.79□□□□□ -0.2
CDH11-213ENST00000567934 EMC6Q9BV81 110 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 RHCGQ9UBD6 479 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 ZNF229Q9UJW7 825 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 RCE1Q9Y256 329 aa13.79□□□□□ -0.2
CDH11-213ENST00000567934 FAM32AQ9Y421 112 aaKnown RBP13.79□□□□□ -0.2
CDH11-213ENST00000567934 PDZD2O15018 2839 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 BLOC1S5-TXNDC5H3BN57 136 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 J3KTA2 159 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 RNF13O43567 381 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 FZD7O75084 574 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 HPRP00739 348 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 PLAUP00749 431 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 HLA-DOBP13765 273 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 FUT1P19526 365 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 UGT2B15P54855 530 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 ROR2Q01974 943 aaKnown RBP13.78□□□□□ -0.2
CDH11-213ENST00000567934 TRAM2Q15035 370 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 ACKR1Q16570 336 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 NCMAPQ5T1S8 102 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 KLHL17Q6TDP4 642 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 RRM2BQ7LG56 351 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 PXKQ7Z7A4 578 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 C1orf162Q8NEQ5 155 aaPredicted RBP13.78□□□□□ -0.2
CDH11-213ENST00000567934 PFN4Q8NHR9 129 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 ZNF426Q9BUY5 554 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 C1QTNF6Q9BXI9 259 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 LINC00470Q9BZP3 86 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 B3GAT2Q9NPZ5 323 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 MEPEQ9NQ76 525 aaPredicted RBP13.78□□□□□ -0.2
CDH11-213ENST00000567934 MED29Q9NX70 200 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 FAM53CQ9NYF3 392 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 A4GNTQ9UNA3 340 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 SAMD4AQ9UPU9 718 aaKnown RBP13.78□□□□□ -0.2
CDH11-213ENST00000567934 AMDHD2Q9Y303 409 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 RNF115Q9Y4L5 304 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 SNX13Q9Y5W8 968 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 V9GYQ6 96 aa13.78□□□□□ -0.2
CDH11-213ENST00000567934 SLC35F4A4IF30 521 aa13.77□□□□□ -0.21
CDH11-213ENST00000567934 M0R1B8 84 aa13.77□□□□□ -0.21
CDH11-213ENST00000567934 M0R3G1 203 aa13.77□□□□□ -0.21
CDH11-213ENST00000567934 PDLIM1O00151 329 aa13.77□□□□□ -0.21
CDH11-213ENST00000567934 TRAF3IP2O43734 574 aaPredicted RBP13.77□□□□□ -0.21
CDH11-213ENST00000567934 WNT11O96014 354 aa13.77□□□□□ -0.21
CDH11-213ENST00000567934 LOXP28300 417 aaPredicted RBP13.77□□□□□ -0.21
CDH11-213ENST00000567934 MSX2P35548 267 aaPredicted RBP13.77□□□□□ -0.21
CDH11-213ENST00000567934 LRBAP50851 2863 aa13.77□□□□□ -0.21
CDH11-213ENST00000567934 ZNF83P51522 516 aa13.77□□□□□ -0.21
CDH11-213ENST00000567934 PRPS1P60891 318 aa13.77□□□□□ -0.21
CDH11-213ENST00000567934 UBE2NP61088 152 aaKnown RBP13.77□□□□□ -0.21
CDH11-213ENST00000567934 BSPH1Q075Z2 132 aa13.77□□□□□ -0.21
CDH11-213ENST00000567934 CAMK2DQ13557 499 aa13.77□□□□□ -0.21
CDH11-213ENST00000567934 C17orf78Q8N4C9 275 aa13.77□□□□□ -0.21
CDH11-213ENST00000567934 ANKK1Q8NFD2 765 aa13.77□□□□□ -0.21
CDH11-213ENST00000567934 OR6N1Q8NGY5 312 aa13.77□□□□□ -0.21
CDH11-213ENST00000567934 BCAS4Q8TDM0 211 aa13.77□□□□□ -0.21
CDH11-213ENST00000567934 TXNDC15Q96J42 360 aa13.77□□□□□ -0.21
CDH11-213ENST00000567934 OR2M2Q96R28 347 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms