RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 LGSNQ5TDP6 509 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 MEDAGQ5VYS4 303 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 ATL3Q6DD88 541 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 CAVIN1Q6NZI2 390 aaKnown RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 SLC25A34Q6PIV7 304 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 WDR59Q6PJI9 974 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 FAM43BQ6ZT52 329 aaPredicted RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 PRSS48Q7RTY5 328 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 APTXQ7Z2E3 356 aaKnown RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 ZNF571Q7Z3V5 609 aaPredicted RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 VPS36Q86VN1 386 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 FAM71AQ8IYT1 594 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 ZNF683Q8IZ20 524 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 OR8H2Q8N162 312 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 ARRDC1Q8N5I2 433 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 MLKLQ8NB16 471 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 RELL2Q8NC24 303 aaPredicted RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 LEMD2Q8NC56 503 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 OR2A12Q8NGT7 310 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 OR2T3Q8NH03 318 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 FIBINQ8TAL6 211 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 FNDC8Q8TC99 324 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 FAM172AQ8WUF8 416 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 PATE1Q8WXA2 126 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 SHC3Q92529 594 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 TAF4BQ92750 862 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 CCDC47Q96A33 483 aaKnown RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 ERP27Q96DN0 273 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 BSCL2Q96G97 398 aaPredicted RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 ELMO2Q96JJ3 720 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 CNDP2Q96KP4 475 aaKnown RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 HSFY1Q96LI6 401 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 RPRD1AQ96P16 312 aaPredicted RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 PEBP4Q96S96 227 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 NPY6RQ99463 290 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 CHP1Q99653 195 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 TSG101Q99816 390 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 GABRG3Q99928 467 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 AGPAT1Q99943 283 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 CITED2Q99967 270 aaPredicted RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 C11orf70Q9BRQ4 267 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 NUSAP1Q9BXS6 441 aaKnown RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 CALN1Q9BXU9 219 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 TM6SF2Q9BZW4 377 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 RSPH9Q9H1X1 276 aaPredicted RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 GANQ9H2C0 597 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 LHX5Q9H2C1 402 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 GOLPH3Q9H4A6 298 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 CLSTN2Q9H4D0 955 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 THAP9Q9H5L6 903 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 HAUS4Q9H6D7 363 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 ZWILCHQ9H900 591 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 AKIRIN1Q9H9L7 192 aaPredicted RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 RDH14Q9HBH5 336 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 POPDC2Q9HBU9 364 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 TM9SF3Q9HD45 589 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 TMEM9BQ9NQ34 198 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 EXOSC3Q9NQT5 275 aaKnown RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 COMMD8Q9NX08 183 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 DDIT4Q9NX09 232 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.01□□□□□ -2.25
SMG1-212ENST00000566328 CHMP5Q9NZZ3 219 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 CGNQ9P2M7 1197 aaKnown RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 TRIM10Q9UDY6 481 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 OR12D3Q9UGF7 316 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 SUN2Q9UH99 717 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 CD84Q9UIB8 345 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 RWDD2AQ9UIY3 292 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 MOSPD1Q9UJG1 213 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 LSM7Q9UK45 103 aaKnown RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 ZNF835Q9Y2P0 537 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 PCYT1BQ9Y5K3 369 aaPredicted RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 U3KQA8 63 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 NBASA2RRP1 2371 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 POLEQ07864 2286 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 SVILO95425 2214 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 MYO7BQ6PIF6 2116 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 PIKFYVEQ9Y2I7 2098 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 PCM1Q15154 2024 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 TNRC6AQ8NDV7 1962 aaKnown RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 PLXNA2O75051 1894 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 NUP210Q8TEM1 1887 aaPredicted RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 TENM4Q6N022 2769 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 KMT2BQ9UMN6 2715 aaPredicted RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 CUBNO60494 3623 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 ANKRD11Q6UB99 2663 aaPredicted RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 CEP295Q9C0D2 2601 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 USP24Q9UPU5 2620 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 COL4A2P08572 1712 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 MPDZO75970 2070 aa1□□□□□ -2.25
SMG1-212ENST00000566328 DNHD1Q96M86 4753 aa1□□□□□ -2.25
SMG1-212ENST00000566328 ATP8B3O60423 1300 aa1□□□□□ -2.25
SMG1-212ENST00000566328 UBE4BO95155 1302 aa1□□□□□ -2.25
SMG1-212ENST00000566328 IGSF10Q6WRI0 2623 aa1□□□□□ -2.25
SMG1-212ENST00000566328 BAHCC1Q9P281 2608 aa1□□□□□ -2.25
SMG1-212ENST00000566328 A0A087X0T9 212 aa1□□□□□ -2.25
SMG1-212ENST00000566328 A0A1B0GTQ1 180 aa1□□□□□ -2.25
SMG1-212ENST00000566328 BICDL2A1A5D9 508 aa1□□□□□ -2.25
SMG1-212ENST00000566328 MAGEB16A2A368 324 aa1□□□□□ -2.25
SMG1-212ENST00000566328 SIGLEC16A6NMB1 481 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms