RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 DNMT1P26358 1616 aaKnown RBP3.72□□□□□ -1.81
CNOT1-209ENST00000566240 SHROOM2Q13796 1616 aa3.72□□□□□ -1.81
CNOT1-209ENST00000566240 NINLQ9Y2I6 1382 aa3.72□□□□□ -1.81
CNOT1-209ENST00000566240 AKNAQ7Z591 1439 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 SETD5Q9C0A6 1442 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 DISP1Q96F81 1524 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 PREX2Q70Z35 1606 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 A6NIZ1 184 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 WRBO00258 174 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 LSM1O15116 133 aaKnown RBP3.71□□□□□ -1.82
CNOT1-209ENST00000566240 CTAG2O75638 210 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 KRT6AP02538 564 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 P0C879 139 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 TBPP20226 339 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 CXCR2P25025 360 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 KIR2DS4P43632 304 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 YAP1P46937 504 aaKnown RBP3.71□□□□□ -1.82
CNOT1-209ENST00000566240 KLK7P49862 253 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 ACLYP53396 1101 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 DIO3P55073 304 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 C21orf59P57076 290 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 RAP1BP61224 184 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 ALKBH6Q3KRA9 238 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 SLC8B1Q6J4K2 584 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 Q6ZN92 141 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 SLC25A48Q6ZT89 311 aaKnown RBP3.71□□□□□ -1.82
CNOT1-209ENST00000566240 CENPQQ7L2Z9 268 aaPredicted RBP3.71□□□□□ -1.82
CNOT1-209ENST00000566240 ZNF571Q7Z3V5 609 aaPredicted RBP3.71□□□□□ -1.82
CNOT1-209ENST00000566240 LUZP2Q86TE4 346 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 BIVMQ86UB2 503 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 PLA2G4DQ86XP0 818 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 FBXO16Q8IX29 292 aaPredicted RBP3.71□□□□□ -1.82
CNOT1-209ENST00000566240 BBOF1Q8ND07 529 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 OR52I1Q8NGK6 324 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 PLPPR1Q8TBJ4 325 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 SLC38A4Q969I6 547 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 MS4A4EQ96PG1 132 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 SMIM14Q96QK8 99 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 ZNF160Q9HCG1 818 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 VNN3Q9NY84 501 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 PITPNC1Q9UKF7 332 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 TCOF1Q13428 1488 aaKnown RBP3.71□□□□□ -1.82
CNOT1-209ENST00000566240 ABCA8O94911 1581 aa3.71□□□□□ -1.82
CNOT1-209ENST00000566240 TTC41PQ6P2S7 1318 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 TROQ12816 1431 aaPredicted RBP3.7□□□□□ -1.82
CNOT1-209ENST00000566240 ARHGEF11O15085 1522 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 CDC42BPAQ5VT25 1732 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 IGHV3OR16-13A0A075B7E8 117 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 FAM168BA1KXE4 195 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 H0YIV9 168 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 CASQ2O14958 399 aaPredicted RBP3.7□□□□□ -1.82
CNOT1-209ENST00000566240 DNAJB6O75190 326 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 SNAPINO95295 136 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 ZNF24P17028 368 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 ZNF43P17038 809 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 PSMB1P20618 241 aaKnown RBP3.7□□□□□ -1.82
CNOT1-209ENST00000566240 RGS8P57771 180 aaPredicted RBP3.7□□□□□ -1.82
CNOT1-209ENST00000566240 RPS15P62841 145 aaKnown RBP3.7□□□□□ -1.82
CNOT1-209ENST00000566240 CSNK1G2P78368 415 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 IL18Q14116 193 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 SLC25A30Q5SVS4 291 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 C1orf146Q5VVC0 180 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 NIPA1Q7RTP0 329 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 MYPOPQ86VE0 399 aaPredicted RBP3.7□□□□□ -1.82
CNOT1-209ENST00000566240 C6orf223Q8N319 242 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 CD177Q8N6Q3 437 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 B3GNT7Q8NFL0 401 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 SPATA3Q8NHX4 192 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 SLC22A8Q8TCC7 542 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 GPR151Q8TDV0 419 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 ACMSDQ8TDX5 336 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 C11orf70Q9BRQ4 267 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 C20orf85Q9H1P6 137 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 RNF167Q9H6Y7 350 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 ZDHHC11Q9H8X9 412 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 MARCH5Q9NX47 278 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 CD274Q9NZQ7 290 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 BTNL2Q9UIR0 455 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 CLEC4EQ9ULY5 219 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 MMP17Q9ULZ9 603 aa3.7□□□□□ -1.82
CNOT1-209ENST00000566240 NUP153P49790 1475 aaKnown RBP3.7□□□□□ -1.82
CNOT1-209ENST00000566240 CFAP74Q9C0B2 1584 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 RAB3GAP2Q9H2M9 1393 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 TRBV11-1A0A0K0K1C0 115 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 DLGAP1O14490 977 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 CLOCKO15516 846 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 ERLIN2O94905 339 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 HSPB1P04792 205 aaKnown RBP3.69□□□□□ -1.82
CNOT1-209ENST00000566240 FGF1P05230 155 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 SLC2A5P22732 501 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 PRDX3P30048 256 aaKnown RBP3.69□□□□□ -1.82
CNOT1-209ENST00000566240 OTX1P32242 354 aaPredicted RBP3.69□□□□□ -1.82
CNOT1-209ENST00000566240 FBXW4P57775 412 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 SELENOTP62341 195 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 ZNF45Q02386 682 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 TGFBR3Q03167 851 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 SASS6Q6UVJ0 657 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 CLEC2AQ6UVW9 174 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 PRSS41Q7RTY9 318 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms