RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ULBP1Q9BZM6 244 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 ZDHHC5Q9C0B5 715 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 HRASLSQ9HDD0 168 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 HCFC1R1Q9NWW0 138 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 RASD1Q9Y272 281 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 KIAA1671Q9BY89 1806 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 FAM227AF5H4B4 570 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 GATBO75879 557 aaKnown RBP2.7□□□□□ -1.98
CHD9-218ENST00000566029 RAB36O95755 333 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 NFYAP23511 347 aaPredicted RBP2.7□□□□□ -1.98
CHD9-218ENST00000566029 SOX18P35713 384 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 KIR3DL1P43629 444 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 NOVA1P51513 510 aaKnown RBP2.7□□□□□ -1.98
CHD9-218ENST00000566029 LUMP51884 338 aaPredicted RBP2.7□□□□□ -1.98
CHD9-218ENST00000566029 ZNF311Q5JNZ3 666 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 PRAMEF14Q5SWL7 426 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 FAM162BQ5T6X4 162 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 HIST2H3PS2Q5TEC6 136 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 GLB1LQ6UWU2 654 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 RNF149Q8NC42 400 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 OR52I1Q8NGK6 324 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 SMIM4Q8WVI0 70 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 OR52E6Q96RD3 313 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 GPR21Q99679 349 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 SUV39H2Q9H5I1 410 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 PITPNC1Q9UKF7 332 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 COL16A1Q07092 1604 aaPredicted RBP2.7□□□□□ -1.98
CHD9-218ENST00000566029 A0A1W2PPK0 400 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 DRGXA6NNA5 263 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 PRAMEF4O60810 478 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 HOXB5P09067 269 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 HOXA5P20719 270 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 GIFP27352 417 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 SPIBQ01892 262 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 SF1Q15637 639 aaKnown RBP2.7□□□□□ -1.98
CHD9-218ENST00000566029 ANXA8L1Q5VT79 327 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 PRAMEF9Q5VWM5 478 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 BCDIN3DQ7Z5W3 292 aaKnown RBP2.7□□□□□ -1.98
CHD9-218ENST00000566029 TMEM173Q86WV6 379 aaPredicted RBP2.7□□□□□ -1.98
CHD9-218ENST00000566029 TRIB3Q96RU7 358 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 GPR174Q9BXC1 333 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 OR8D2Q9GZM6 311 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 WNT5BQ9H1J7 359 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 PRDM13Q9H4Q3 707 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 SGK2Q9HBY8 427 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 NLE1Q9NVX2 485 aaPredicted RBP2.7□□□□□ -1.98
CHD9-218ENST00000566029 DDIT4Q9NX09 232 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 CKLFQ9UBR5 152 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 C6orf47O95873 294 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 DGKAP23743 735 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 BDH1Q02338 343 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 ATXN7L3Q14CW9 347 aaPredicted RBP2.7□□□□□ -1.98
CHD9-218ENST00000566029 RBMS2Q15434 407 aaKnown RBP2.7□□□□□ -1.98
CHD9-218ENST00000566029 PYY3Q5JQD4 70 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 LIPJQ5W064 366 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 RSPO2Q6UXX9 243 aaPredicted RBP2.7□□□□□ -1.98
CHD9-218ENST00000566029 DPY19L4Q7Z388 723 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 TRIM46Q7Z4K8 759 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 TAC4Q86UU9 113 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 MISPQ8IVT2 679 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 OR6J1Q8NGC5 347 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 THAP4Q8WY91 577 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 TSSK3Q96PN8 268 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 GPR61Q9BZJ8 451 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 EIF5A2Q9GZV4 153 aaKnown RBP2.7□□□□□ -1.98
CHD9-218ENST00000566029 TSPAN10Q9H1Z9 355 aaPredicted RBP2.7□□□□□ -1.98
CHD9-218ENST00000566029 NOX3Q9HBY0 568 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 DUSP22Q9NRW4 184 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 GJD2Q9UKL4 321 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 TNFSF18Q9UNG2 199 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 PPP1R3CQ9UQK1 317 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 SSUH2Q9Y2M2 353 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 TRAV14DV4A0A0A6YYC5 116 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 A0A1W2PR80 420 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 EREGO14944 169 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 EMC8O43402 210 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 FADS1O60427 444 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 SDC1P18827 310 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 CTSSP25774 331 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 PRPS1P60891 318 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 BLOC1S1P78537 153 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 RAB40BQ12829 278 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 KIAA0141Q14154 515 aaPredicted RBP2.7□□□□□ -1.98
CHD9-218ENST00000566029 TPGS2Q68CL5 300 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 IFI44Q8TCB0 444 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 SMAP2Q8WU79 429 aaPredicted RBP2.7□□□□□ -1.98
CHD9-218ENST00000566029 MR1Q95460 341 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 ESAMQ96AP7 390 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 R3HDM4Q96D70 268 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 CNTNAP3BQ96NU0 1288 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 ZNF559Q9BR84 538 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 GLIS2Q9BZE0 524 aaPredicted RBP2.7□□□□□ -1.98
CHD9-218ENST00000566029 TMEM27Q9HBJ8 222 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 JPH1Q9HDC5 661 aaPredicted RBP2.7□□□□□ -1.98
CHD9-218ENST00000566029 CYTL1Q9NRR1 136 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 KCNIP2Q9NS61 270 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 TMEM140Q9NV12 185 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 TVP23BQ9NYZ1 205 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 FARSAQ9Y285 508 aaKnown RBP2.7□□□□□ -1.98
CHD9-218ENST00000566029 COL24A1Q17RW2 1714 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms