RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 NINJ1Q92982 152 aa12.2□□□□□ -0.46
HERPUD1-210ENST00000565966 PIK3IP1Q96FE7 263 aa12.2□□□□□ -0.46
HERPUD1-210ENST00000565966 CLPTM1LQ96KA5 538 aa12.2□□□□□ -0.46
HERPUD1-210ENST00000565966 HS6ST2Q96MM7 605 aa12.2□□□□□ -0.46
HERPUD1-210ENST00000565966 OXGR1Q96P68 337 aa12.2□□□□□ -0.46
HERPUD1-210ENST00000565966 THTPAQ9BU02 230 aa12.2□□□□□ -0.46
HERPUD1-210ENST00000565966 FNDC11Q9BVV2 318 aa12.2□□□□□ -0.46
HERPUD1-210ENST00000565966 LIME1Q9H400 295 aa12.2□□□□□ -0.46
HERPUD1-210ENST00000565966 FKRPQ9H9S5 495 aa12.2□□□□□ -0.46
HERPUD1-210ENST00000565966 MRPL39Q9NYK5 338 aaKnown RBP12.2□□□□□ -0.46
HERPUD1-210ENST00000565966 NDUFAF4Q9P032 175 aa12.2□□□□□ -0.46
HERPUD1-210ENST00000565966 B3GAT1Q9P2W7 334 aa12.2□□□□□ -0.46
HERPUD1-210ENST00000565966 UPB1Q9UBR1 384 aa12.2□□□□□ -0.46
HERPUD1-210ENST00000565966 MALT1Q9UDY8 824 aa12.2□□□□□ -0.46
HERPUD1-210ENST00000565966 ST6GALNAC2Q9UJ37 374 aa12.2□□□□□ -0.46
HERPUD1-210ENST00000565966 ITGB1BP2Q9UKP3 347 aa12.2□□□□□ -0.46
HERPUD1-210ENST00000565966 RAI1Q7Z5J4 1906 aaPredicted RBP12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 LOC102725191A0A1B0GVB3 256 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 A0A1W2PPR1 153 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 hCG_2039718K7EN88 272 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 PLPP3O14495 311 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 GYG2O15488 501 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 KLF4O43474 513 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 HPRP00739 348 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 IGF2P01344 180 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 NQO1P15559 274 aaKnown RBP12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 ZNF43P17038 809 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 LSM11P83369 360 aaKnown RBP eCLIP12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 FAPQ12884 760 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 PMS2P3Q13401 168 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 TRAM2Q15035 370 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 TAB1Q15750 504 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 DNAL1Q4LDG9 190 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 SSX8Q7RTT4 187 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 SLC46A3Q7Z3Q1 461 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 P2RY8Q86VZ1 359 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 CYP4Z1Q86W10 505 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 WFDC8Q8IUA0 241 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 LRRC17Q8N6Y2 441 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 POMGNT2Q8NAT1 580 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 PIK3C3Q8NEB9 887 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 OR5J2Q8NH18 312 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 BTBD10Q9BSF8 475 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 MUC13Q9H3R2 512 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 NGBQ9NPG2 151 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 C20orf141Q9NUB4 165 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 TAS2R16Q9NYV7 291 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 MED31Q9Y3C7 131 aa12.19□□□□□ -0.46
HERPUD1-210ENST00000565966 ARID1AO14497 2285 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 TCRBV5S2A0A599 114 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 CIB4A0PJX0 185 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 PIP5K1CO60331 668 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 OR7A10O76100 309 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 DIRAS1O95057 198 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 ASAH2BP0C7U1 165 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 HLA-DOBP13765 273 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 RHCEP18577 417 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 LOXP28300 417 aaPredicted RBP12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 NR1H2P55055 460 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 IL1RL1Q01638 556 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 PUDPQ08623 228 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 C1DQ13901 141 aaKnown RBP12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 TIMM23BQ5SRD1 257 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 TSPO2Q5TGU0 170 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 OR7E24Q6IFN5 339 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 LCN8Q6JVE9 175 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 PGM2L1Q6PCE3 622 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 NHLRC1Q6VVB1 395 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 DHFR2Q86XF0 187 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 MUCL1Q96DR8 90 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 ASB9Q96DX5 294 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 SGTBQ96EQ0 304 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 SLCO5A1Q9H2Y9 848 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 NMNAT1Q9HAN9 279 aaPredicted RBP12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 NANSQ9NR45 359 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 SLC7A10Q9NS82 523 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 ZNF229Q9UJW7 825 aa12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 FAM32AQ9Y421 112 aaKnown RBP12.18□□□□□ -0.46
HERPUD1-210ENST00000565966 A0A087WUU8 490 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 OR6C65A6NJZ3 312 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 PDLIM1O00151 329 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 ACOT8O14734 319 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 TRAF3IP2O43734 574 aaPredicted RBP12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 RAD51DO75771 328 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 ITGA5P08648 1049 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 UMPSP11172 480 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 ITGA2P17301 1181 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 FUT1P19526 365 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 DNASE1P24855 282 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 SELENOPP49908 381 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 IST1P53990 364 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 FOXG1P55316 489 aaPredicted RBP12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 CLDN17P56750 224 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 TGFBR3Q03167 851 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 ZP4Q12836 540 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 STK11Q15831 433 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 MTX3Q5HYI7 312 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 ALKBH2Q6NS38 261 aa12.17□□□□□ -0.46
HERPUD1-210ENST00000565966 NIPAL3Q6P499 406 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms