RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 SLC15A3Q8IY34 581 aa16.1■□□□□ 0.17
SYNGR3-204ENST00000564642 PIAS4Q8N2W9 510 aaPredicted RBP16.1■□□□□ 0.17
SYNGR3-204ENST00000564642 GPR137CQ8N3F9 429 aa16.1■□□□□ 0.17
SYNGR3-204ENST00000564642 WDR31Q8NA23 367 aa16.1■□□□□ 0.17
SYNGR3-204ENST00000564642 KBTBD8Q8NFY9 601 aa16.1■□□□□ 0.17
SYNGR3-204ENST00000564642 TPD52L3Q96J77 140 aa16.1■□□□□ 0.17
SYNGR3-204ENST00000564642 RADILQ96JH8 1075 aa16.1■□□□□ 0.17
SYNGR3-204ENST00000564642 ALKBH3Q96Q83 286 aaPredicted RBP16.1■□□□□ 0.17
SYNGR3-204ENST00000564642 C1QTNF6Q9BXI9 259 aa16.1■□□□□ 0.17
SYNGR3-204ENST00000564642 CXorf56Q9H5V9 222 aa16.1■□□□□ 0.17
SYNGR3-204ENST00000564642 MRPL39Q9NYK5 338 aaKnown RBP16.1■□□□□ 0.17
SYNGR3-204ENST00000564642 MGAT4BQ9UQ53 548 aa16.1■□□□□ 0.17
SYNGR3-204ENST00000564642 MAGED1Q9Y5V3 778 aaPredicted RBP16.1■□□□□ 0.17
SYNGR3-204ENST00000564642 HIVEP1P15822 2718 aa16.1■□□□□ 0.17
SYNGR3-204ENST00000564642 LRRN3E7EW58 273 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 GSTA4O15217 222 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 ZNF432O94892 652 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 LYPD3O95274 346 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 THY1P04216 161 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 TNFRSF1BP20333 461 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 DRD4P21917 467 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 PTAFRP25105 342 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 OR1E2P47887 323 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 GYS2P54840 703 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 SELENOWP63302 87 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 ROR2Q01974 943 aaKnown RBP16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 LIPEQ05469 1076 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 PUDPQ08623 228 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 HACD2Q6Y1H2 254 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 DEPDC4Q8N2C3 294 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 OR5J2Q8NH18 312 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 LZICQ8WZA0 190 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 NEUROG1Q92886 237 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 PERPQ96FX8 193 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 POM121Q96HA1 1249 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 TMUB1Q9BVT8 246 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 SLC19A3Q9BZV2 496 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 POLR2J2Q9GZM3 115 aaKnown RBP16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 POLR2J3Q9H1A7 115 aaKnown RBP16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 MYLK2Q9H1R3 596 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 NANSQ9NR45 359 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 LAMP3Q9UQV4 416 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 NOX1Q9Y5S8 564 aa16.09■□□□□ 0.17
SYNGR3-204ENST00000564642 KPNA4O00629 521 aaPredicted RBP16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 PLPP3O14495 311 aa16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 NDUFAB1O14561 156 aa16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 SHOX2O60902 331 aaPredicted RBP16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 TMCC2O75069 709 aa16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 CH25HO95992 272 aa16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 HIST1H2ABP04908 130 aa16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 ADORA3P0DMS8 318 aa16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 HLA-DOBP13765 273 aa16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 CD40P25942 277 aa16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 SLC7A2P52569 658 aa16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 UBE2NP61088 152 aaKnown RBP16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 POU3F1Q03052 451 aaPredicted RBP16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 FOXD4Q12950 439 aaPredicted RBP16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 HIST3H2AQ7L7L0 130 aa16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 PXKQ7Z7A4 578 aa16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 TSPYL5Q86VY4 417 aaPredicted RBP16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 PIK3C3Q8NEB9 887 aa16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 WFDC11Q8NEX6 87 aa16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 OR1K1Q8NGR3 316 aa16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 SMAP2Q8WU79 429 aaPredicted RBP16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 HIST1H2ACQ93077 130 aa16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 BOD1Q96IK1 185 aa16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 CISD1Q9NZ45 108 aaKnown RBP16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 RIMS3Q9UJD0 308 aa16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 POU2F3Q9UKI9 436 aa16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 CELSR1Q9NYQ6 3014 aa16.08■□□□□ 0.16
SYNGR3-204ENST00000564642 HEATR1Q9H583 2144 aaKnown RBP16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 ZNF726A6NNF4 738 aa16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 SHISA9B4DS77 424 aa16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 C11orf98E9PRG8 122 aa16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 NME4O00746 187 aa16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 TRAF3IP2O43734 574 aaPredicted RBP16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 OR5F1O95221 314 aa16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 HPRP00739 348 aa16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 UMPSP11172 480 aa16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 PRDX6P30041 224 aa16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 RPS4XP62701 263 aaKnown RBP16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 ZNF74Q16587 644 aa16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 TBRG1Q3YBR2 411 aa16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 HIKESHIQ53FT3 197 aa16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 SLC22A25Q6T423 547 aa16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 LINGO2Q7L985 606 aa16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 ANKK1Q8NFD2 765 aa16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 OR2M2Q96R28 347 aa16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 EMC6Q9BV81 110 aa16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 ALG2Q9H553 416 aa16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 FKRPQ9H9S5 495 aa16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 GPR35Q9HC97 309 aa16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 OBP2BQ9NPH6 170 aa16.07■□□□□ 0.16
SYNGR3-204ENST00000564642 RPL36A-HNRNPH2H7BZ11 118 aa16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 CXCR6O00574 342 aa16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 SERPINI2O75830 405 aa16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 PAX7P23759 505 aa16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 IFNA8P32881 189 aa16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 PTH2RP49190 550 aa16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 CDH11P55287 796 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms