RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 TRAPPC4Q9Y296 219 aa19.71■□□□□ 0.75
LINC01960-201ENST00000563759 TRAV17A0A0B4J275 112 aa19.71■□□□□ 0.75
LINC01960-201ENST00000563759 GLSO94925 669 aaPredicted RBP19.71■□□□□ 0.75
LINC01960-201ENST00000563759 PMS2P2O95744 297 aa19.71■□□□□ 0.75
LINC01960-201ENST00000563759 TFAP2AP05549 437 aa19.71■□□□□ 0.75
LINC01960-201ENST00000563759 POU3F2P20265 443 aaPredicted RBP19.71■□□□□ 0.75
LINC01960-201ENST00000563759 RPL5P46777 297 aaKnown RBP19.71■□□□□ 0.75
LINC01960-201ENST00000563759 PPIAP62937 165 aaKnown RBP19.71■□□□□ 0.75
LINC01960-201ENST00000563759 SLC35A1P78382 337 aa19.71■□□□□ 0.75
LINC01960-201ENST00000563759 ST3GAL4Q11206 333 aa19.71■□□□□ 0.75
LINC01960-201ENST00000563759 KRR1Q13601 381 aaKnown RBP19.71■□□□□ 0.75
LINC01960-201ENST00000563759 EMC4Q5J8M3 183 aa19.71■□□□□ 0.75
LINC01960-201ENST00000563759 GPR139Q6DWJ6 353 aa19.71■□□□□ 0.75
LINC01960-201ENST00000563759 NIPAL3Q6P499 406 aa19.71■□□□□ 0.75
LINC01960-201ENST00000563759 SPARTQ8N0X7 666 aa19.71■□□□□ 0.75
LINC01960-201ENST00000563759 HCAR1Q9BXC0 346 aa19.71■□□□□ 0.75
LINC01960-201ENST00000563759 MGAQ8IWI9 3026 aa19.7■□□□□ 0.74
LINC01960-201ENST00000563759 A0A1W2PRG6 482 aa19.7■□□□□ 0.74
LINC01960-201ENST00000563759 IMPA2O14732 288 aa19.7■□□□□ 0.74
LINC01960-201ENST00000563759 SEC14L5O43304 696 aa19.7■□□□□ 0.74
LINC01960-201ENST00000563759 FZD7O75084 574 aa19.7■□□□□ 0.74
LINC01960-201ENST00000563759 MT-ND2P03891 347 aa19.7■□□□□ 0.74
LINC01960-201ENST00000563759 CELA3AP09093 270 aa19.7■□□□□ 0.74
LINC01960-201ENST00000563759 PIPP12273 146 aaPredicted RBP19.7■□□□□ 0.74
LINC01960-201ENST00000563759 SLC15A1P46059 708 aa19.7■□□□□ 0.74
LINC01960-201ENST00000563759 SLC16A1P53985 500 aa19.7■□□□□ 0.74
LINC01960-201ENST00000563759 NEDD8Q15843 81 aa19.7■□□□□ 0.74
LINC01960-201ENST00000563759 HYAL4Q2M3T9 481 aa19.7■□□□□ 0.74
LINC01960-201ENST00000563759 KLHL12Q53G59 568 aa19.7■□□□□ 0.74
LINC01960-201ENST00000563759 PRSS48Q7RTY5 328 aa19.7■□□□□ 0.74
LINC01960-201ENST00000563759 UBQLNLQ8IYU4 475 aa19.7■□□□□ 0.74
LINC01960-201ENST00000563759 GHDCQ8N2G8 530 aa19.7■□□□□ 0.74
LINC01960-201ENST00000563759 KDM8Q8N371 416 aa19.7■□□□□ 0.74
LINC01960-201ENST00000563759 ZADH2Q8N4Q0 377 aa19.7■□□□□ 0.74
LINC01960-201ENST00000563759 TMEM99Q8N816 258 aa19.7■□□□□ 0.74
LINC01960-201ENST00000563759 NMNAT3Q96T66 252 aa19.7■□□□□ 0.74
LINC01960-201ENST00000563759 LINC01387J3KSC0 135 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 TNFSF11O14788 317 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 MRPS14O60783 128 aaKnown RBP19.69■□□□□ 0.74
LINC01960-201ENST00000563759 FADS2O95864 444 aaKnown RBP19.69■□□□□ 0.74
LINC01960-201ENST00000563759 TXNDC12O95881 172 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 CDK1P06493 297 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 MTNR1AP48039 350 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 CD97P48960 835 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 GFRA1P56159 465 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 RPS7P62081 194 aaKnown RBP19.69■□□□□ 0.74
LINC01960-201ENST00000563759 CSNK2A1P68400 391 aaPredicted RBP19.69■□□□□ 0.74
LINC01960-201ENST00000563759 ZP4Q12836 540 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 ACKR1Q16570 336 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 LEG1Q6P5S2 330 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 LRRC69Q6ZNQ3 347 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 ADPRHL1Q8NDY3 354 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 PCDHGA9Q9Y5G4 932 aaKnown RBP19.69■□□□□ 0.74
LINC01960-201ENST00000563759 MS4A18H0YCH9 400 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 EIF1AYO14602 144 aaKnown RBP19.69■□□□□ 0.74
LINC01960-201ENST00000563759 STSP08842 583 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 C21orf33P30042 268 aaPredicted RBP19.69■□□□□ 0.74
LINC01960-201ENST00000563759 HTR1FP30939 366 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 POU3F1Q03052 451 aaPredicted RBP19.69■□□□□ 0.74
LINC01960-201ENST00000563759 MS4A18Q3C1V0 323 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 FAM109AQ8N4B1 249 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 SVOPQ8N4V2 548 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 OR9Q1Q8NGQ5 310 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 RNFT2Q96EX2 444 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 OR51V1Q9H2C8 321 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 TXNIPQ9H3M7 391 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 QPCTLQ9NXS2 382 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 ZNF346Q9UL40 294 aaKnown RBP19.69■□□□□ 0.74
LINC01960-201ENST00000563759 COMMD3-BMI1R4GMX3 469 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 PTPRQQ9UMZ3 2332 aa19.69■□□□□ 0.74
LINC01960-201ENST00000563759 A0A1W2PNV4 684 aa19.68■□□□□ 0.74
LINC01960-201ENST00000563759 XKRYO14609 159 aa19.68■□□□□ 0.74
LINC01960-201ENST00000563759 CLDN20P56880 219 aa19.68■□□□□ 0.74
LINC01960-201ENST00000563759 RPL27P61353 136 aaKnown RBP19.68■□□□□ 0.74
LINC01960-201ENST00000563759 MESTQ5EB52 335 aa19.68■□□□□ 0.74
LINC01960-201ENST00000563759 GTF2IRD2BQ6EKJ0 949 aa19.68■□□□□ 0.74
LINC01960-201ENST00000563759 BORAQ6PGQ7 559 aa19.68■□□□□ 0.74
LINC01960-201ENST00000563759 PAQR6Q6TCH4 344 aa19.68■□□□□ 0.74
LINC01960-201ENST00000563759 GTF2IRD2Q86UP8 949 aa19.68■□□□□ 0.74
LINC01960-201ENST00000563759 NPEPL1Q8NDH3 523 aa19.68■□□□□ 0.74
LINC01960-201ENST00000563759 PTP4A1Q93096 173 aa19.68■□□□□ 0.74
LINC01960-201ENST00000563759 SLC6A15Q9H2J7 730 aa19.68■□□□□ 0.74
LINC01960-201ENST00000563759 A0A0J9YW62 118 aa19.67■□□□□ 0.74
LINC01960-201ENST00000563759 DPPA5A6NC42 116 aa19.67■□□□□ 0.74
LINC01960-201ENST00000563759 NPIPA5E9PKD4 350 aa19.67■□□□□ 0.74
LINC01960-201ENST00000563759 K7ENP7 123 aa19.67■□□□□ 0.74
LINC01960-201ENST00000563759 IGHMP01871 453 aa19.67■□□□□ 0.74
LINC01960-201ENST00000563759 GYPBP06028 91 aa19.67■□□□□ 0.74
LINC01960-201ENST00000563759 CLUP10909 449 aa19.67■□□□□ 0.74
LINC01960-201ENST00000563759 HLA-DOBP13765 273 aa19.67■□□□□ 0.74
LINC01960-201ENST00000563759 STARP49675 285 aa19.67■□□□□ 0.74
LINC01960-201ENST00000563759 MVKQ03426 396 aa19.67■□□□□ 0.74
LINC01960-201ENST00000563759 KLHL22Q53GT1 634 aa19.67■□□□□ 0.74
LINC01960-201ENST00000563759 INO80CQ6PI98 192 aaPredicted RBP19.67■□□□□ 0.74
LINC01960-201ENST00000563759 ESPNLQ6ZVH7 1005 aa19.67■□□□□ 0.74
LINC01960-201ENST00000563759 MEPCEQ7L2J0 689 aaKnown RBP19.67■□□□□ 0.74
LINC01960-201ENST00000563759 GPAT4Q86UL3 456 aa19.67■□□□□ 0.74
LINC01960-201ENST00000563759 GGNQ86UU5 652 aa19.67■□□□□ 0.74
LINC01960-201ENST00000563759 ARIH2OSQ8N7S6 290 aa19.67■□□□□ 0.74
LINC01960-201ENST00000563759 SIGLEC11Q96RL6 698 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms