RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 GHSRQ92847 366 aa17.3■□□□□ 0.36
SMPD3-203ENST00000563226 MED11Q9P086 117 aa17.3■□□□□ 0.36
SMPD3-203ENST00000563226 COL27A1Q8IZC6 1860 aaPredicted RBP17.29■□□□□ 0.36
SMPD3-203ENST00000563226 A8MVM7 634 aa17.29■□□□□ 0.36
SMPD3-203ENST00000563226 SC5DO75845 299 aa17.29■□□□□ 0.36
SMPD3-203ENST00000563226 CD53P19397 219 aa17.29■□□□□ 0.36
SMPD3-203ENST00000563226 PSMB10P40306 273 aa17.29■□□□□ 0.36
SMPD3-203ENST00000563226 BAK1Q16611 211 aa17.29■□□□□ 0.36
SMPD3-203ENST00000563226 FAM69AQ5T7M9 428 aa17.29■□□□□ 0.36
SMPD3-203ENST00000563226 ARSKQ6UWY0 536 aa17.29■□□□□ 0.36
SMPD3-203ENST00000563226 MAMDC2Q7Z304 686 aaPredicted RBP17.29■□□□□ 0.36
SMPD3-203ENST00000563226 CEACAM19Q7Z692 300 aa17.29■□□□□ 0.36
SMPD3-203ENST00000563226 MISPQ8IVT2 679 aa17.29■□□□□ 0.36
SMPD3-203ENST00000563226 OR6V1Q8N148 313 aa17.29■□□□□ 0.36
SMPD3-203ENST00000563226 OR8H2Q8N162 312 aa17.29■□□□□ 0.36
SMPD3-203ENST00000563226 DIRAS2Q96HU8 199 aa17.29■□□□□ 0.36
SMPD3-203ENST00000563226 FBXO4Q9UKT5 387 aa17.29■□□□□ 0.36
SMPD3-203ENST00000563226 KLHDC2Q9Y2U9 406 aa17.29■□□□□ 0.36
SMPD3-203ENST00000563226 PCDHGB7Q9Y5F8 929 aa17.29■□□□□ 0.36
SMPD3-203ENST00000563226 ANKUB1A6NFN9 424 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 OGG1O15527 345 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 SSX4O60224 188 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 HPGDSO60760 199 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 OR2J2O76002 312 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 GPANK1O95872 356 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 SYPP08247 313 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 PRKCAP17252 672 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 IL11P20809 199 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 F8A1P23610 371 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 MTNR1BP49286 362 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 CDK5R1Q15078 307 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 CLPPQ16740 277 aaPredicted RBP17.28■□□□□ 0.36
SMPD3-203ENST00000563226 EMC4Q5J8M3 183 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 FAM131AQ6UXB0 335 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 OR8K3Q8NH51 312 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 SP140LQ9H930 580 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 TIGARQ9NQ88 270 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 MYOTQ9UBF9 498 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 TVP23AA6NH52 213 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 BOLA2-SMG1P6H3BVE0 249 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 ZFAND5O76080 213 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 HNRNPCP07910 306 aaKnown RBP eCLIP17.28■□□□□ 0.36
SMPD3-203ENST00000563226 CELA2AP08217 269 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 GDI2P50395 445 aaKnown RBP17.28■□□□□ 0.36
SMPD3-203ENST00000563226 GBX2P52951 348 aaPredicted RBP17.28■□□□□ 0.36
SMPD3-203ENST00000563226 C17orf67Q0P5P2 114 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 SGCBQ16585 318 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 FAM198BQ6UWH4 519 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 BPHLQ86WA6 291 aaPredicted RBP17.28■□□□□ 0.36
SMPD3-203ENST00000563226 OR10G3Q8NGC4 313 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 OR5L2Q8NGL0 311 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 RNF138Q8WVD3 245 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 SMIM19Q96E16 107 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 SYT4Q9H2B2 425 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 C19orf25Q9UFG5 118 aaPredicted RBP17.28■□□□□ 0.36
SMPD3-203ENST00000563226 TBC1D24Q9ULP9 559 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 VDAC3Q9Y277 283 aa17.28■□□□□ 0.36
SMPD3-203ENST00000563226 TMEM221A6NGB7 291 aa17.27■□□□□ 0.36
SMPD3-203ENST00000563226 SHISA8B8ZZ34 492 aa17.27■□□□□ 0.36
SMPD3-203ENST00000563226 M0R296 226 aa17.27■□□□□ 0.36
SMPD3-203ENST00000563226 ARHGEF9O43307 516 aa17.27■□□□□ 0.36
SMPD3-203ENST00000563226 MT-ATP6P00846 226 aa17.27■□□□□ 0.36
SMPD3-203ENST00000563226 AHCYP23526 432 aa17.27■□□□□ 0.36
SMPD3-203ENST00000563226 PTGDSP41222 190 aa17.27■□□□□ 0.36
SMPD3-203ENST00000563226 OR10A3P58181 314 aa17.27■□□□□ 0.36
SMPD3-203ENST00000563226 CDC20Q12834 499 aa17.27■□□□□ 0.36
SMPD3-203ENST00000563226 TRA2AQ13595 282 aaKnown RBP eCLIP17.27■□□□□ 0.36
SMPD3-203ENST00000563226 PCOLCEQ15113 449 aa17.27■□□□□ 0.36
SMPD3-203ENST00000563226 ACSM3Q53FZ2 586 aa17.27■□□□□ 0.36
SMPD3-203ENST00000563226 PXKQ7Z7A4 578 aa17.27■□□□□ 0.36
SMPD3-203ENST00000563226 TIGD4Q8IY51 512 aa17.27■□□□□ 0.36
SMPD3-203ENST00000563226 PM20D2Q8IYS1 436 aa17.27■□□□□ 0.36
SMPD3-203ENST00000563226 THAP4Q8WY91 577 aa17.27■□□□□ 0.36
SMPD3-203ENST00000563226 MR1Q95460 341 aa17.27■□□□□ 0.36
SMPD3-203ENST00000563226 NEURL2Q9BR09 285 aa17.27■□□□□ 0.36
SMPD3-203ENST00000563226 RALGAPA1Q6GYQ0 2036 aa17.27■□□□□ 0.35
SMPD3-203ENST00000563226 FABP12A6NFH5 140 aa17.27■□□□□ 0.35
SMPD3-203ENST00000563226 DLGAP3O95886 979 aa17.27■□□□□ 0.35
SMPD3-203ENST00000563226 UMODP07911 640 aa17.27■□□□□ 0.35
SMPD3-203ENST00000563226 CAPZA2P47755 286 aa17.27■□□□□ 0.35
SMPD3-203ENST00000563226 SIRPAP78324 504 aa17.27■□□□□ 0.35
SMPD3-203ENST00000563226 TRAM1Q15629 374 aa17.27■□□□□ 0.35
SMPD3-203ENST00000563226 SLC6A19Q695T7 634 aa17.27■□□□□ 0.35
SMPD3-203ENST00000563226 GPR139Q6DWJ6 353 aa17.27■□□□□ 0.35
SMPD3-203ENST00000563226 CADM3Q8N126 398 aa17.27■□□□□ 0.35
SMPD3-203ENST00000563226 ZNF417Q8TAU3 575 aa17.27■□□□□ 0.35
SMPD3-203ENST00000563226 RNF166Q96A37 237 aaPredicted RBP17.27■□□□□ 0.35
SMPD3-203ENST00000563226 ZNF587Q96SQ5 575 aaPredicted RBP17.27■□□□□ 0.35
SMPD3-203ENST00000563226 WDR54Q9H977 334 aa17.27■□□□□ 0.35
SMPD3-203ENST00000563226 INIPQ9NRY2 104 aa17.27■□□□□ 0.35
SMPD3-203ENST00000563226 KLRF1Q9NZS2 232 aa17.27■□□□□ 0.35
SMPD3-203ENST00000563226 MOKQ9UQ07 419 aa17.27■□□□□ 0.35
SMPD3-203ENST00000563226 EML6Q6ZMW3 1958 aa17.26■□□□□ 0.35
SMPD3-203ENST00000563226 A0A1W2PPK0 400 aa17.26■□□□□ 0.35
SMPD3-203ENST00000563226 PTTG1O95997 202 aa17.26■□□□□ 0.35
SMPD3-203ENST00000563226 EDNRAP25101 427 aa17.26■□□□□ 0.35
SMPD3-203ENST00000563226 RPS27P42677 84 aaKnown RBP17.26■□□□□ 0.35
SMPD3-203ENST00000563226 RPS11P62280 158 aaKnown RBP eCLIP17.26■□□□□ 0.35
SMPD3-203ENST00000563226 PPP3R1P63098 170 aa17.26■□□□□ 0.35
SMPD3-203ENST00000563226 MC2RQ01718 297 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms