RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 A0A0G2JLM5 398 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 LOC110117498-PIK3R3F6TDL0 507 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 AIM2O14862 343 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 CASQ2O14958 399 aaPredicted RBP2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 RAB29O14966 203 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 CLOCKO15516 846 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 TSPAN13O95857 204 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 KRT14P02533 472 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 FGGP02679 453 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 CRYGBP07316 175 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 STAG3L3P0CL85 134 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 IL12AP29459 219 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 IFNA8P32881 189 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 BTCP35070 178 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 OPRD1P41143 372 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 CRYBB2P43320 205 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 RPS5P46782 204 aaKnown RBP2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 MEOX2P50222 304 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 P2RY4P51582 365 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 PLK1P53350 603 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 KRTAP12-2P59991 146 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 ARHGAP19Q14CB8 494 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 WDR43Q15061 677 aaKnown RBP eCLIP2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 KRTAP13-3Q3SY46 172 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 PARP15Q460N3 678 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 PAGE3Q5JUK9 113 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 PPM1LQ5SGD2 360 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 TTC19Q6DKK2 380 aaPredicted RBP2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 TRIM40Q6P9F5 258 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 UNQ9370/PRO34162Q6UXP9 181 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 CCDC73Q6ZRK6 1079 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 BZW1Q7L1Q6 419 aaKnown RBP2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 TMCO2Q7Z6W1 182 aaPredicted RBP2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 THOC6Q86W42 341 aaKnown RBP2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 ZNF100Q8IYN0 542 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 RDH10Q8IZV5 341 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 PUSL1Q8N0Z8 303 aaKnown RBP2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 C6orf223Q8N319 242 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 ZNF321PQ8N8H1 164 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 FNDC5Q8NAU1 212 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 SLC7A13Q8TCU3 470 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 FAM151AQ8WW52 585 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 DCUN1D4Q92564 292 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 PEX13Q92968 403 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 FGGYQ96C11 551 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 CCDC126Q96EE4 140 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 OR5B12Q96R08 314 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 OR8B4Q96RC9 309 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 ZNF184Q99676 751 aaPredicted RBP2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 KIR2DL4Q99706 377 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 ATP5SQ99766 215 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 POLR2J2Q9GZM3 115 aaKnown RBP2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 POLR2J3Q9H1A7 115 aaKnown RBP2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 UGT1A10Q9HAW8 530 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 CCNB1IP1Q9NPC3 277 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 GIN1Q9NXP7 522 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 AHSPQ9NZD4 102 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 APOBEC3BQ9UH17 382 aaKnown RBP2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 KIF25Q9UIL4 384 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 NUP50Q9UKX7 468 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 VSIG4Q9Y279 399 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 ARPC4-TTLL3A0A0A6YYG9 625 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 KLF18A0A0U1RQI7 1052 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 LRRIQ3A6PVS8 624 aaPredicted RBP2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 AKR7A2O43488 359 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 CLIC3O95833 236 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 GCFC2P16383 781 aaKnown RBP2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 EIF2S2P20042 333 aaKnown RBP2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 KLK2P20151 261 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 TUBG1P23258 451 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 ZBTB25P24278 435 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 DCKP27707 260 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 ANP32AP39687 249 aaKnown RBP2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 CCT6AP40227 531 aaKnown RBP2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 RGRP47804 291 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 OR1G1P47890 313 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 TMED10P49755 219 aaKnown RBP2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 ACTA2P62736 377 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 ACTG2P63267 376 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 ACTC1P68032 377 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 ACTA1P68133 377 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 IRX3P78415 501 aaPredicted RBP2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 REG3AQ06141 175 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 SELENBP1Q13228 472 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 CHRNA6Q15825 494 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 PRR4Q16378 134 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 TMEM53Q6P2H8 277 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 CNIH2Q6PI25 160 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 TMIGD1Q6UXZ0 262 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 ZNF620Q6ZNG0 422 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 TMEM179BQ7Z7N9 219 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 PLA2G4DQ86XP0 818 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 APOBEC3FQ8IUX4 373 aaKnown RBP2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 ZNF584Q8IVC4 421 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 KATNAL2Q8IYT4 538 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 ZBED8Q8IZ13 594 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 GPR137CQ8N3F9 429 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 MS4A15Q8N5U1 240 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 EID2Q8N6I1 236 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 ZNF525Q8N782 197 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms