RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	SLC38A1	Q9H2H9	487 aa		7.1	□□□□□ -1.27
CKLF-208	ENST00000563092	CRLF2	Q9HC73	371 aa		7.1	□□□□□ -1.27
CKLF-208	ENST00000563092	GPR35	Q9HC97	309 aa		7.1	□□□□□ -1.27
CKLF-208	ENST00000563092	DDX28	Q9NUL7	540 aa	Known RBP	7.1	□□□□□ -1.27
CKLF-208	ENST00000563092	MED29	Q9NX70	200 aa		7.1	□□□□□ -1.27
CKLF-208	ENST00000563092	ASIC5	Q9NY37	505 aa		7.1	□□□□□ -1.27
CKLF-208	ENST00000563092	NKIRAS2	Q9NYR9	191 aa		7.1	□□□□□ -1.27
CKLF-208	ENST00000563092	ZNF224	Q9NZL3	707 aa		7.1	□□□□□ -1.27
CKLF-208	ENST00000563092	MYEF2	Q9P2K5	600 aa	Known RBP	7.1	□□□□□ -1.27
CKLF-208	ENST00000563092	B3GAT1	Q9P2W7	334 aa		7.1	□□□□□ -1.27
CKLF-208	ENST00000563092	PYCARD	Q9ULZ3	195 aa		7.1	□□□□□ -1.27
CKLF-208	ENST00000563092	PPIAL4E	A0A075B759	164 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	PPIAL4C	A0A0B4J2A2	164 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	LOC102725191	A0A1B0GVB3	256 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	CFAP73	A6NFT4	308 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092		A8MVM7	634 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	ZNF99	A8MXY4	864 aa	Predicted RBP	7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	PPIAL4D	F5H284	164 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	HMGN4	O00479	90 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	CFLAR	O15519	480 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	RIPK2	O43353	540 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	PPIH	O43447	177 aa	Known RBP	7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	TRAF3IP2	O43734	574 aa	Predicted RBP	7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	PEX11A	O75192	247 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	CHRNG	P07510	517 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	RNASE1	P07998	156 aa	Known RBP	7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	TFPT	P0C1Z6	253 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	PPIAL4F	P0DN26	164 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	TCN1	P20061	433 aa	Predicted RBP	7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	FPR2	P25090	351 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	GCH1	P30793	250 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	CRYBB2	P43320	205 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	CLDN8	P56748	225 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	IL13RA1	P78552	427 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	ZP4	Q12836	540 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	PCLAF	Q15004	111 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	MAD2L1BP	Q15013	274 aa	Predicted RBP	7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	ATAD3B	Q5T9A4	648 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	IL23R	Q5VWK5	629 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	HIST2H2BD	Q6DRA6	164 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	NHLRC1	Q6VVB1	395 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	TRMT10C	Q7L0Y3	403 aa	Known RBP	7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	HMGN2P46	Q86SG4	172 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	C10orf107	Q8IVU9	208 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	RAB8B	Q92930	207 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	NEURL3	Q96EH8	262 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	TRNT1	Q96Q11	434 aa	Known RBP	7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	C1orf50	Q9BV19	199 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	PTDSS2	Q9BVG9	487 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	TXLNGY	Q9BZA5	131 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	DENND2D	Q9H6A0	471 aa	Predicted RBP	7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	PPIAL4A	Q9Y536	164 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	MMP24	Q9Y5R2	645 aa		7.09	□□□□□ -1.27
CKLF-208	ENST00000563092	NUP214	P35658	2090 aa	Predicted RBP	7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	KMT2C	Q8NEZ4	4911 aa	Known RBP	7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	IGLV3-9	A0A075B6K5	115 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	CDHR4	A6H8M9	788 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	DNAJC9-AS1	A6NH13	148 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	NPHS1	O60500	1241 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	C1QC	P02747	245 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	CHRM4	P08173	479 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	PNMT	P11086	282 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	NAT2	P11245	290 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	G6PD	P11413	515 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	UQCRC2	P22695	453 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	ZFP36	P26651	326 aa	Known RBP	7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	ARRB2	P32121	409 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	SOAT1	P35610	550 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	MAGEB1	P43366	347 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	CCT5	P48643	541 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	RPS23	P62266	143 aa	Known RBP	7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	EGR4	Q05215	589 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	NPRL3	Q12980	569 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	MAPK11	Q15759	364 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	GSG1	Q2KHT4	349 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	CEACAM16	Q2WEN9	425 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	ZNF311	Q5JNZ3	666 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	MRPL2	Q5T653	305 aa	Known RBP	7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	C1orf140	Q5VVS0	124 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	DCAF12L2	Q5VW00	463 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	PRAMEF8	Q5VWM4	474 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	PRAMEF7	Q5VXH5	474 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	OR4F3	Q6IEY1	312 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	LRRC74B	Q6ZQY2	392 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	DDIAS	Q8IXT1	998 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	ZNF440	Q8IYI8	595 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	SIGLECL1	Q8N7X8	197 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	DEFB108B	Q8NET1	73 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	MFSD8	Q8NHS3	518 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	STK35	Q8TDR2	534 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	RAB39B	Q96DA2	213 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	OR2M2	Q96R28	347 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	SYT3	Q9BQG1	590 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	C1QTNF5	Q9BXJ0	243 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	C7orf69	Q9H7B7	122 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	MTHFD2L	Q9H903	347 aa	Predicted RBP	7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	ADPRHL2	Q9NX46	363 aa		7.08	□□□□□ -1.28
CKLF-208	ENST00000563092	ZNF346	Q9UL40	294 aa	Known RBP	7.08	□□□□□ -1.28

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