RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 V9GYH0 126 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 ZC3H12DA2A288 527 aaKnown RBP10.57□□□□□ -0.72
PCAT1-202ENST00000561978 GNB5O14775 395 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 TO15178 435 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 TIAF1O95411 115 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 HIST1H1CP16403 213 aaKnown RBP10.57□□□□□ -0.72
PCAT1-202ENST00000561978 PRKACBP22694 351 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 IL12BP29460 328 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 MTNR1BP49286 362 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 ACTA2P62736 377 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 ACTG2P63267 376 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 MC2RQ01718 297 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 SCN1BQ07699 218 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 SKP2Q13309 424 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 GGTLC2Q14390 218 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 NDUFAF6Q330K2 333 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 CEP78Q5JTW2 689 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 ARHGAP40Q5TG30 622 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 TMEM164Q5U3C3 297 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 PRAMEF17Q5VTA0 474 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 FAM131AQ6UXB0 335 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 SLC29A4Q7RTT9 530 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 ATG4DQ86TL0 474 aaPredicted RBP10.57□□□□□ -0.72
PCAT1-202ENST00000561978 MS4A15Q8N5U1 240 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 CYB561A3Q8NBI2 242 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 HTRA1Q92743 480 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 ARSGQ96EG1 525 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 GPX7Q96SL4 187 aaPredicted RBP10.57□□□□□ -0.72
PCAT1-202ENST00000561978 TBX5Q99593 518 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 SDHCQ99643 169 aaPredicted RBP10.57□□□□□ -0.72
PCAT1-202ENST00000561978 CCDC86Q9H6F5 360 aaKnown RBP10.57□□□□□ -0.72
PCAT1-202ENST00000561978 NRIP3Q9NQ35 241 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 SRPK3Q9UPE1 567 aa10.57□□□□□ -0.72
PCAT1-202ENST00000561978 PTPRQQ9UMZ3 2332 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 FER1L5A0AVI2 2057 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 BOD1L1Q8NFC6 3051 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 A0A1W2PQD3 144 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 CDRT15L2A8MXV6 281 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 B4E171 279 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 IMPA2O14732 288 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 EIF4E2O60573 245 aaKnown RBP10.56□□□□□ -0.72
PCAT1-202ENST00000561978 APEHP13798 732 aaKnown RBP10.56□□□□□ -0.72
PCAT1-202ENST00000561978 RPS4XP62701 263 aaKnown RBP10.56□□□□□ -0.72
PCAT1-202ENST00000561978 CD83Q01151 205 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 IL10RAQ13651 578 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 GLYR1Q49A26 553 aaPredicted RBP10.56□□□□□ -0.72
PCAT1-202ENST00000561978 DCAF12Q5T6F0 453 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 PAMR1Q6UXH9 720 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 VASH1Q7L8A9 365 aaPredicted RBP10.56□□□□□ -0.72
PCAT1-202ENST00000561978 JAZF1Q86VZ6 243 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 PPP1R3BQ86XI6 285 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 SYT14Q8NB59 555 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 PLPP5Q8NEB5 264 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 OR4K13Q8NH42 304 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.56□□□□□ -0.72
PCAT1-202ENST00000561978 TSLPQ969D9 159 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 ZNF501Q96CX3 271 aaPredicted RBP10.56□□□□□ -0.72
PCAT1-202ENST00000561978 TAAR9Q96RI9 348 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 CNN2Q99439 309 aaKnown RBP10.56□□□□□ -0.72
PCAT1-202ENST00000561978 TIMP4Q99727 224 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 SRRQ9GZT4 340 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 TEX51A0A1B0GUA7 166 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 MCIDASD6RGH6 385 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 J3QLW9 94 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 TMCC2O75069 709 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 DXOO77932 396 aaKnown RBP10.56□□□□□ -0.72
PCAT1-202ENST00000561978 BPNT1O95861 308 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 SERPINA3P01011 423 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 MRPL3P09001 348 aaKnown RBP10.56□□□□□ -0.72
PCAT1-202ENST00000561978 ZNF19P17023 458 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 ZNF28P17035 718 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 CCR4P51679 360 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 PNLIPRP2P54317 469 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 ACY1Q03154 408 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 HSF2Q03933 536 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 CD226Q15762 336 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 VASNQ6EMK4 673 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 PWWP2BQ6NUJ5 590 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 TMEM91Q6ZNR0 172 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 GDPD3Q7L5L3 318 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 TPRA1Q86W33 373 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 SYS1Q8N2H4 156 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 LRRC17Q8N6Y2 441 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 ZNF321PQ8N8H1 164 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 C17orf47Q8NEP4 570 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 OR1N1Q8NGS0 311 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 ZNF563Q8TA94 476 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 GAL3ST4Q96RP7 486 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 ADOQ96SZ5 270 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 NUDT9Q9BW91 350 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 MIXL1Q9H2W2 232 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 NANSQ9NR45 359 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 RARRES3Q9UL19 164 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 HIF3AQ9Y2N7 669 aa10.56□□□□□ -0.72
PCAT1-202ENST00000561978 CD8B2A6NJW9 211 aa10.55□□□□□ -0.72
PCAT1-202ENST00000561978 LRRTM2O43300 516 aa10.55□□□□□ -0.72
PCAT1-202ENST00000561978 TLX3O43711 291 aaPredicted RBP10.55□□□□□ -0.72
PCAT1-202ENST00000561978 SLC19A2O60779 497 aa10.55□□□□□ -0.72
PCAT1-202ENST00000561978 CLUP10909 449 aa10.55□□□□□ -0.72
PCAT1-202ENST00000561978 CD8BP10966 210 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms