RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 OPN4Q9UHM6 478 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 PRR19A6NJB7 356 aa12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 F5H5P2 479 aa12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 KAT7O95251 611 aa12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 ANXA2P07355 339 aaKnown RBP12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 GABRA1P14867 456 aa12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 H2BFSP57053 126 aa12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 ZMYND11Q15326 602 aa12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 RBMS2Q15434 407 aaKnown RBP12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 C2orf68Q2NKX9 166 aa12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 Q499Y3 187 aa12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 SLC35D3Q5M8T2 416 aa12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 LEG1Q6P5S2 330 aa12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 FIGLAQ6QHK4 219 aa12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 OR4N2Q8NGD1 307 aa12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 OR5AK2Q8NH90 309 aa12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 TNFAIP8L1Q8WVP5 186 aa12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 PMM1Q92871 262 aa12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 RERGQ96A58 199 aaPredicted RBP12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 SIPA1Q96FS4 1042 aa12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 ADAD1Q96M93 576 aaKnown RBP12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 UTP23Q9BRU9 249 aaKnown RBP12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 TRPV4Q9HBA0 871 aa12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 ZNF346Q9UL40 294 aaKnown RBP12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 RWDD3Q9Y3V2 267 aa12.77□□□□□ -0.36
VPS9D1-202ENST00000561976 PRR32B1ATL7 298 aa12.77□□□□□ -0.37
VPS9D1-202ENST00000561976 OR10H2O60403 315 aa12.77□□□□□ -0.37
VPS9D1-202ENST00000561976 LDOC1O95751 146 aaPredicted RBP12.77□□□□□ -0.37
VPS9D1-202ENST00000561976 TACSTD2P09758 323 aa12.77□□□□□ -0.37
VPS9D1-202ENST00000561976 CCL5P13501 91 aa12.77□□□□□ -0.37
VPS9D1-202ENST00000561976 LTBQ06643 244 aa12.77□□□□□ -0.37
VPS9D1-202ENST00000561976 PRRT3Q5FWE3 981 aa12.77□□□□□ -0.37
VPS9D1-202ENST00000561976 B3GNTL1Q67FW5 361 aaPredicted RBP12.77□□□□□ -0.37
VPS9D1-202ENST00000561976 PDZD9Q8IXQ8 264 aa12.77□□□□□ -0.37
VPS9D1-202ENST00000561976 ESX1Q8N693 406 aa12.77□□□□□ -0.37
VPS9D1-202ENST00000561976 SPPL3Q8TCT6 385 aa12.77□□□□□ -0.37
VPS9D1-202ENST00000561976 NSMAFQ92636 917 aa12.77□□□□□ -0.37
VPS9D1-202ENST00000561976 OR2M4Q96R27 311 aa12.77□□□□□ -0.37
VPS9D1-202ENST00000561976 ALG12Q9BV10 488 aa12.77□□□□□ -0.37
VPS9D1-202ENST00000561976 B3GNT4Q9C0J1 378 aa12.77□□□□□ -0.37
VPS9D1-202ENST00000561976 POLE3Q9NRF9 147 aa12.77□□□□□ -0.37
VPS9D1-202ENST00000561976 ETV7Q9Y603 341 aa12.77□□□□□ -0.37
VPS9D1-202ENST00000561976 TMEM72A0PK05 275 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 HMSDA8MTL9 139 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 A8MXK9 166 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 TOR1AO14656 332 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 GLCEO94923 617 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 GLSO94925 669 aaPredicted RBP12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 ADRA2CP18825 462 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 C5AR1P21730 350 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 MAPK3P27361 379 aaPredicted RBP12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 ADH7P40394 386 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 GPR143P51810 404 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 GMFBP60983 142 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 STPG2Q8N412 459 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 OR4C16Q8NGL9 310 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 OR8K3Q8NH51 312 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 Q96M85 177 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 RSPH9Q9H1X1 276 aaPredicted RBP12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 LYRM4Q9HD34 91 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 FBXL2Q9UKC9 423 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 CDV3Q9UKY7 258 aaKnown RBP12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 A0A1B0GTQ1 180 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 BLOC1S5-TXNDC5H3BN57 136 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 CTNSO60931 367 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 FKTNO75072 461 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 NKX2-2O95096 273 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 SPDEFO95238 335 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 ADH1BP00325 375 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 MGAT2Q10469 447 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 PLA2G7Q13093 441 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 IL10RAQ13651 578 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 FAM53BQ14153 422 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 ZNF273Q14593 569 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 ZNHIT3Q15649 155 aaPredicted RBP12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 ODF4Q2M2E3 257 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 MAMSTRQ6ZN01 415 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 ZNF550Q7Z398 422 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 C10orf53Q8N6V4 93 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 ZNF454Q8N9F8 522 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 OR2AK2Q8NG84 335 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 PAWRQ96IZ0 340 aaKnown RBP12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 TSSK2Q96PF2 358 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 GLS2Q9UI32 602 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 IKZF2Q9UKS7 526 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 A0A0C4DFX4 3053 aa12.76□□□□□ -0.37
VPS9D1-202ENST00000561976 PRSS38A1L453 326 aa12.75□□□□□ -0.37
VPS9D1-202ENST00000561976 MEIS3P1A6NDR6 274 aa12.75□□□□□ -0.37
VPS9D1-202ENST00000561976 C4orf47A7E2U8 309 aa12.75□□□□□ -0.37
VPS9D1-202ENST00000561976 H0YGG7 62 aa12.75□□□□□ -0.37
VPS9D1-202ENST00000561976 TMEM127O75204 238 aa12.75□□□□□ -0.37
VPS9D1-202ENST00000561976 KDM4BO94953 1096 aa12.75□□□□□ -0.37
VPS9D1-202ENST00000561976 TIMP1P01033 207 aa12.75□□□□□ -0.37
VPS9D1-202ENST00000561976 IL32P24001 234 aa12.75□□□□□ -0.37
VPS9D1-202ENST00000561976 MAP3K8P41279 467 aa12.75□□□□□ -0.37
VPS9D1-202ENST00000561976 MECP2P51608 486 aaKnown RBP12.75□□□□□ -0.37
VPS9D1-202ENST00000561976 ARF3P61204 181 aaPredicted RBP12.75□□□□□ -0.37
VPS9D1-202ENST00000561976 ALKBH1Q13686 389 aaKnown RBP12.75□□□□□ -0.37
VPS9D1-202ENST00000561976 MELKQ14680 651 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms