RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 ARHGAP11BQ3KRB8 267 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 ALKBH2Q6NS38 261 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 TMEM108Q6UXF1 575 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 KCTD20Q7Z5Y7 419 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 ELMOD2Q8IZ81 293 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 C4orf33Q8N1A6 199 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 C17orf78Q8N4C9 275 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 KRTCAP2Q8N6L1 136 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 C1orf162Q8NEQ5 155 aaPredicted RBP7.38□□□□□ -1.23
PALB2-202ENST00000561514 OR5D16Q8NGK9 328 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 C10orf105Q8TEF2 133 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 C10orf82Q8WW14 230 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 TMEM234Q8WY98 164 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 TMEM158Q8WZ71 300 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 APOPT1Q96IL0 206 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 ADAD1Q96M93 576 aaKnown RBP7.38□□□□□ -1.23
PALB2-202ENST00000561514 OR5B2Q96R09 309 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 RHNO1Q9BSD3 238 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 CACNG6Q9BXT2 260 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 PAIP1Q9H074 479 aaKnown RBP7.38□□□□□ -1.23
PALB2-202ENST00000561514 QRSL1Q9H0R6 528 aaKnown RBP7.38□□□□□ -1.23
PALB2-202ENST00000561514 RAD21L1Q9H4I0 556 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 S100A14Q9HCY8 104 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 YAE1D1Q9NRH1 226 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 SERINC1Q9NRX5 453 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 TAS2R16Q9NYV7 291 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 LPAR3Q9UBY5 353 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 GIMAP2Q9UG22 337 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 DCTN4Q9UJW0 460 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 HDGFL3Q9Y3E1 203 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 HEATR5AQ86XA9 2040 aa7.38□□□□□ -1.23
PALB2-202ENST00000561514 ALPK2Q86TB3 2170 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 CR1P17927 2039 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 FAAHO00519 579 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 RNASET2O00584 256 aaKnown RBP7.37□□□□□ -1.23
PALB2-202ENST00000561514 GPR171O14626 319 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 PHF1O43189 567 aaPredicted RBP7.37□□□□□ -1.23
PALB2-202ENST00000561514 FCMRO60667 390 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 BCAS1O75363 584 aaPredicted RBP7.37□□□□□ -1.23
PALB2-202ENST00000561514 STX11O75558 287 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 OR5F1O95221 314 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 CSTAP01040 98 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 ITGA5P08648 1049 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 CSF3P09919 207 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 RNF144AP50876 292 aaPredicted RBP7.37□□□□□ -1.23
PALB2-202ENST00000561514 NUDT6P53370 316 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 CLDN8P56748 225 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 SPOCK1Q08629 439 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 FUT5Q11128 374 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 MERTKQ12866 999 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 GABRA6Q16445 453 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 MAPK14Q16539 360 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 DUSP7Q16829 419 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 SPDYE7PQ495Y7 208 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 ZBED5Q49AG3 693 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 KCTD21Q4G0X4 260 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 ATP6AP1LQ52LC2 224 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 OR7E24Q6IFN5 339 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 ZFP1Q6P2D0 407 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 KLHL17Q6TDP4 642 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 CLEC2AQ6UVW9 174 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 EIF3MQ7L2H7 374 aaKnown RBP7.37□□□□□ -1.23
PALB2-202ENST00000561514 GRINAQ7Z429 371 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 AKAP14Q86UN6 197 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 DDIASQ8IXT1 998 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 ZNF100Q8IYN0 542 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 MUC15Q8N387 334 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 WDR31Q8NA23 367 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 OR8J2Q8NGG1 315 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 OR5AK3PQ8NH89 298 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 LHFPL5Q8TAF8 219 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 PIGXQ8TBF5 258 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 EPS8L3Q8TE67 593 aaKnown RBP7.37□□□□□ -1.23
PALB2-202ENST00000561514 PROX1Q92786 737 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 RNF166Q96A37 237 aaPredicted RBP7.37□□□□□ -1.23
PALB2-202ENST00000561514 APH1AQ96BI3 265 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 ARL5BQ96KC2 179 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 DOK1Q99704 481 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 THUMPD3Q9BV44 507 aaKnown RBP7.37□□□□□ -1.23
PALB2-202ENST00000561514 DUSP26Q9BV47 211 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 EML4Q9HC35 981 aaKnown RBP7.37□□□□□ -1.23
PALB2-202ENST00000561514 HMG20AQ9NP66 347 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 MRGBPQ9NV56 204 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 CHRNA9Q9UGM1 479 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 TRAPPC4Q9Y296 219 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 SLC35A3Q9Y2D2 325 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 FIS1Q9Y3D6 152 aa7.37□□□□□ -1.23
PALB2-202ENST00000561514 SPIN1Q9Y657 262 aaPredicted RBP7.37□□□□□ -1.23
PALB2-202ENST00000561514 RNF103-CHMP3A0A140T963 221 aa7.36□□□□□ -1.23
PALB2-202ENST00000561514 TLDC2A0PJX2 215 aa7.36□□□□□ -1.23
PALB2-202ENST00000561514 FAM234BA2RU67 622 aa7.36□□□□□ -1.23
PALB2-202ENST00000561514 ISPDA4D126 451 aa7.36□□□□□ -1.23
PALB2-202ENST00000561514 OR6C65A6NJZ3 312 aa7.36□□□□□ -1.23
PALB2-202ENST00000561514 TRPC5OSA6NMA1 111 aa7.36□□□□□ -1.23
PALB2-202ENST00000561514 VWC2LB2RUY7 222 aa7.36□□□□□ -1.23
PALB2-202ENST00000561514 C9JVG2 144 aa7.36□□□□□ -1.23
PALB2-202ENST00000561514 SULT2B1O00204 365 aa7.36□□□□□ -1.23
PALB2-202ENST00000561514 NDUFA2O43678 99 aa7.36□□□□□ -1.23
PALB2-202ENST00000561514 SSX4O60224 188 aa7.36□□□□□ -1.23
PALB2-202ENST00000561514 DEAF1O75398 565 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms