RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	TRBV11-1	A0A0K0K1C0	115 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	RAB19	A4D1S5	217 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	METTL21EP	A6NDL7	271 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	ARHGEF33	A8MVX0	844 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431		E5RI56	91 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	PRSS44	E7EML9	344 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	EEF2K	O00418	725 aa	Known RBP	3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	EIF3H	O15372	352 aa	Known RBP eCLIP	3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	PSMD3	O43242	534 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	PRKN	O60260	465 aa	Predicted RBP	3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	OR10H2	O60403	315 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	RNASEH1	O60930	286 aa	Known RBP	3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	LRP3	O75074	770 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	LRCH4	O75427	683 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	PRKRA	O75569	313 aa	Known RBP	3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	ZNF432	O94892	652 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	RAB3D	O95716	219 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	CPNE6	O95741	557 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	IGLV3-25	P01717	112 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	IFNA6	P05013	189 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	APOD	P05090	189 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	SERPIND1	P05546	499 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	GPI	P06744	558 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	ERCC1	P07992	297 aa	Predicted RBP	3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	CISD3	P0C7P0	127 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	OCM	P0CE72	109 aa	Predicted RBP	3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	SAG	P10523	405 aa	Predicted RBP	3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	IRF2	P14316	349 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	MPZ	P25189	248 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	CDH5	P33151	784 aa	Predicted RBP	3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	TNFRSF4	P43489	277 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	RPL21	P46778	160 aa	Known RBP	3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	KLK7	P49862	253 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	SGSH	P51688	502 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	ACTB	P60709	375 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	RAB4B	P61018	213 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	ACTA2	P62736	377 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	ACTG1	P63261	375 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	ACTG2	P63267	376 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	ACTC1	P68032	377 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	ACTA1	P68133	377 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	DLK1	P80370	383 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	MYL5	Q02045	173 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	PAX5	Q02548	391 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	IRF8	Q02556	426 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	TSPAN31	Q12999	210 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	EIF4EBP2	Q13542	120 aa	Predicted RBP	3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	ELAVL3	Q14576	367 aa	Known RBP	3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	LPAL2	Q16609	132 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	UGT3A2	Q3SY77	523 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	PTPN20	Q4JDL3	420 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	SYT14P1	Q58G82	188 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	C6orf226	Q5I0X4	101 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	DCAF10	Q5QP82	559 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	SYPL2	Q5VXT5	272 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	TIGD3	Q6B0B8	471 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	TMEM225	Q6GV28	225 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	PRR27	Q6MZM9	219 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	RHBDD2	Q6NTF9	364 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	RNASEK	Q6P5S7	137 aa	Known RBP	3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	C19orf48	Q6RUI8	117 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	CD164L2	Q6UWJ8	174 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	TMEM107	Q6UX40	140 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	CEACAM20	Q6UY09	585 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	LINGO4	Q6UY18	593 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	RTL4	Q6ZR62	310 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	CDHR3	Q6ZTQ4	885 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	ZNF771	Q7L3S4	317 aa	Predicted RBP	3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	LHFPL4	Q7Z7J7	247 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	ISCA2	Q86U28	154 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	TAC4	Q86UU9	113 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	SLC47A2	Q86VL8	602 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	SLC22A16	Q86VW1	577 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	ZFAND4	Q86XD8	727 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	LGI2	Q8N0V4	545 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	EID3	Q8N140	333 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	GABRG1	Q8N1C3	465 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	ALLC	Q8N6M5	410 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	NPEPL1	Q8NDH3	523 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	OR51L1	Q8NGJ5	315 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	OR4A15	Q8NGL6	344 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	OR5M1	Q8NGP8	315 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	OR4A16	Q8NH70	328 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	OLIG1	Q8TAK6	271 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	FGFBP3	Q8TAT2	258 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	WFDC5	Q8TCV5	224 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	SPRYD4	Q8WW59	207 aa	Predicted RBP	3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	PIGC	Q92535	297 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	GTF2H4	Q92759	462 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	ADIPOR1	Q96A54	375 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	PINX1	Q96BK5	328 aa	Known RBP	3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	ASB9	Q96DX5	294 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	HSFY1	Q96LI6	401 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	C9orf72	Q96LT7	481 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	CPXM1	Q96SM3	734 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	CTRC	Q99895	268 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	CENPK	Q9BS16	269 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	FUCA2	Q9BTY2	467 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	TRIM4	Q9C037	500 aa		3.58	□□□□□ -1.84
LRRC28-222	ENST00000561431	WWP1	Q9H0M0	922 aa		3.58	□□□□□ -1.84

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