RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 LRRN3E7EW58 273 aa15.02■□□□□ -0
CDC42BPB-208ENST00000561271 M0QX08 132 aa15.02■□□□□ -0
CDC42BPB-208ENST00000561271 FXYD1O00168 92 aa15.02■□□□□ -0
CDC42BPB-208ENST00000561271 SLC43A1O75387 559 aa15.02■□□□□ -0
CDC42BPB-208ENST00000561271 BGLAPP02818 100 aa15.02■□□□□ -0
CDC42BPB-208ENST00000561271 TROVE2P10155 538 aaKnown RBP eCLIP15.02■□□□□ -0
CDC42BPB-208ENST00000561271 NQO1P15559 274 aaKnown RBP15.02■□□□□ -0
CDC42BPB-208ENST00000561271 FABP6P51161 128 aa15.02■□□□□ -0
CDC42BPB-208ENST00000561271 METTL21CQ5VZV1 264 aa15.02■□□□□ -0
CDC42BPB-208ENST00000561271 HMBOX1Q6NT76 420 aa15.02■□□□□ -0
CDC42BPB-208ENST00000561271 H1FNTQ75WM6 255 aaPredicted RBP15.02■□□□□ -0
CDC42BPB-208ENST00000561271 FBXL14Q8N1E6 418 aa15.02■□□□□ -0
CDC42BPB-208ENST00000561271 DEPDC4Q8N2C3 294 aa15.02■□□□□ -0
CDC42BPB-208ENST00000561271 MUC15Q8N387 334 aa15.02■□□□□ -0
CDC42BPB-208ENST00000561271 ADPRHL1Q8NDY3 354 aa15.02■□□□□ -0
CDC42BPB-208ENST00000561271 OR4D11Q8NGI4 311 aa15.02■□□□□ -0
CDC42BPB-208ENST00000561271 OR6T1Q8NGN1 323 aa15.02■□□□□ -0
CDC42BPB-208ENST00000561271 EPYCQ99645 322 aa15.02■□□□□ -0
CDC42BPB-208ENST00000561271 GRIP2Q9C0E4 1043 aa15.02■□□□□ -0
CDC42BPB-208ENST00000561271 CBLN4Q9NTU7 201 aa15.02■□□□□ -0
CDC42BPB-208ENST00000561271 IGHV1-18A0A0C4DH31 117 aa15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 CPSF4LA6NMK7 179 aaKnown RBP15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 HLA-DOBP13765 273 aa15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 CD247P20963 164 aa15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 UBE2NP61088 152 aaKnown RBP15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 POU3F1Q03052 451 aaPredicted RBP15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 RABL3Q5HYI8 236 aa15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 SWT1Q5T5J6 900 aaKnown RBP15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 REP15Q6BDI9 236 aa15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 TSPYL5Q86VY4 417 aaPredicted RBP15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 RBM45Q8IUH3 476 aaKnown RBP15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 UEVLDQ8IX04 471 aa15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 TMEM123Q8N131 208 aa15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 GPR137CQ8N3F9 429 aa15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 C10orf53Q8N6V4 93 aa15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 HTRA1Q92743 480 aa15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 BCL2L2Q92843 193 aaPredicted RBP15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 SLC41A3Q96GZ6 507 aa15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 BOD1Q96IK1 185 aa15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 OR2M2Q96R28 347 aa15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 TMEM43Q9BTV4 400 aa15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 ASPNQ9BXN1 380 aa15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 FKRPQ9H9S5 495 aa15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 OBP2BQ9NPH6 170 aa15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 MOKQ9UQ07 419 aa15.01□□□□□ -0.01
CDC42BPB-208ENST00000561271 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15□□□□□ -0.01
CDC42BPB-208ENST00000561271 MS4A18H0YCH9 400 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 CHP2O43745 196 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 AKAP8O43823 692 aaKnown RBP15□□□□□ -0.01
CDC42BPB-208ENST00000561271 FMO6PO60774 539 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 SEC14L2O76054 403 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 PCSK6P29122 969 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 GZMMP51124 257 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 ARFIP2P53365 341 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 CRYBA2P53672 197 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 SH3BGRP55822 239 aaPredicted RBP15□□□□□ -0.01
CDC42BPB-208ENST00000561271 ARF1P84077 181 aaKnown RBP15□□□□□ -0.01
CDC42BPB-208ENST00000561271 KLF10Q13118 480 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 MFSD13AQ14CX5 517 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 VMACQ2NL98 169 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 MS4A18Q3C1V0 323 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 ENTPD8Q5MY95 495 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 C1QTNF12Q5T7M4 302 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 CARD17Q5XLA6 110 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 NANOGP8Q6NSW7 305 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 ZNF544Q6NX49 715 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 ZNF613Q6PF04 617 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 WDR88Q6ZMY6 472 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 PATL1Q86TB9 770 aaKnown RBP15□□□□□ -0.01
CDC42BPB-208ENST00000561271 SLC30A8Q8IWU4 369 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 SCAIQ8N9R8 606 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 ZNF837Q96EG3 531 aaPredicted RBP15□□□□□ -0.01
CDC42BPB-208ENST00000561271 SLC38A2Q96QD8 506 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 EVA1AQ9H8M9 152 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 NANOGQ9H9S0 305 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 SEC61A2Q9H9S3 476 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 BARX1Q9HBU1 254 aaPredicted RBP15□□□□□ -0.01
CDC42BPB-208ENST00000561271 GPR35Q9HC97 309 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 USP22Q9UPT9 525 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 CORINQ9Y5Q5 1042 aa15□□□□□ -0.01
CDC42BPB-208ENST00000561271 ARPC4-TTLL3A0A0A6YYG9 625 aa14.99□□□□□ -0.01
CDC42BPB-208ENST00000561271 MRASO14807 208 aa14.99□□□□□ -0.01
CDC42BPB-208ENST00000561271 SSX4O60224 188 aa14.99□□□□□ -0.01
CDC42BPB-208ENST00000561271 SERPINI2O75830 405 aa14.99□□□□□ -0.01
CDC42BPB-208ENST00000561271 THY1P04216 161 aa14.99□□□□□ -0.01
CDC42BPB-208ENST00000561271 C8BP07358 591 aa14.99□□□□□ -0.01
CDC42BPB-208ENST00000561271 VIMP08670 466 aaKnown RBP14.99□□□□□ -0.01
CDC42BPB-208ENST00000561271 NUDT6P53370 316 aa14.99□□□□□ -0.01
CDC42BPB-208ENST00000561271 GUCY1A3Q02108 690 aa14.99□□□□□ -0.01
CDC42BPB-208ENST00000561271 KRTAP1-1Q07627 177 aa14.99□□□□□ -0.01
CDC42BPB-208ENST00000561271 PMS2P3Q13401 168 aa14.99□□□□□ -0.01
CDC42BPB-208ENST00000561271 CYLC2Q14093 348 aaPredicted RBP14.99□□□□□ -0.01
CDC42BPB-208ENST00000561271 CEACAM16Q2WEN9 425 aa14.99□□□□□ -0.01
CDC42BPB-208ENST00000561271 MMEL1Q495T6 779 aa14.99□□□□□ -0.01
CDC42BPB-208ENST00000561271 PHYHD1Q5SRE7 291 aa14.99□□□□□ -0.01
CDC42BPB-208ENST00000561271 INTS11Q5TA45 600 aaKnown RBP14.99□□□□□ -0.01
CDC42BPB-208ENST00000561271 ANKRD16Q6P6B7 361 aa14.99□□□□□ -0.01
CDC42BPB-208ENST00000561271 DNM1P46Q6ZS02 220 aa14.99□□□□□ -0.01
CDC42BPB-208ENST00000561271 MYPOPQ86VE0 399 aaPredicted RBP14.99□□□□□ -0.01
CDC42BPB-208ENST00000561271 SNX32Q86XE0 403 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms