RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 ALKBH3Q96Q83 286 aaPredicted RBP13.98□□□□□ -0.17
LMX1B-204ENST00000561065 TMEM43Q9BTV4 400 aa13.98□□□□□ -0.17
LMX1B-204ENST00000561065 C1QTNF6Q9BXI9 259 aa13.98□□□□□ -0.17
LMX1B-204ENST00000561065 ASPNQ9BXN1 380 aa13.98□□□□□ -0.17
LMX1B-204ENST00000561065 FAM107BQ9H098 131 aa13.98□□□□□ -0.17
LMX1B-204ENST00000561065 SLCO5A1Q9H2Y9 848 aa13.98□□□□□ -0.17
LMX1B-204ENST00000561065 SLC17A5Q9NRA2 495 aa13.98□□□□□ -0.17
LMX1B-204ENST00000561065 ARMCX1Q9P291 453 aa13.98□□□□□ -0.17
LMX1B-204ENST00000561065 B3GAT1Q9P2W7 334 aa13.98□□□□□ -0.17
LMX1B-204ENST00000561065 GDF2Q9UK05 429 aaPredicted RBP13.98□□□□□ -0.17
LMX1B-204ENST00000561065 A0A0B4J2E0 115 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 A0A1B0GX12 115 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 M0R1B8 84 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 OR6A2O95222 327 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 MT-ATP6P00846 226 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 MPGP29372 298 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 PRDX6P30041 224 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 ACVR1BP36896 505 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 IL1RL1Q01638 556 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 NRF1Q16656 503 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 HIKESHIQ53FT3 197 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 TTC33Q6PID6 262 aaPredicted RBP13.97□□□□□ -0.17
LMX1B-204ENST00000561065 KLHL17Q6TDP4 642 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 TMEM108Q6UXF1 575 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 HACD2Q6Y1H2 254 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 DNM1P46Q6ZS02 220 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 CREB3L2Q70SY1 520 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 CALHM3Q86XJ0 350 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 KDM8Q8N371 416 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 C17orf78Q8N4C9 275 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 MAPK1IP1LQ8NDC0 245 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 GTPBP3Q969Y2 492 aaKnown RBP13.97□□□□□ -0.17
LMX1B-204ENST00000561065 RCN3Q96D15 328 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 RADILQ96JH8 1075 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 ZNF583Q96ND8 569 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 OXGR1Q96P68 337 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 ARHGDIGQ99819 225 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 ABCA2Q9BZC7 2435 aa13.97□□□□□ -0.17
LMX1B-204ENST00000561065 CUBNO60494 3623 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 HIVEP2P31629 2446 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 LOC102725191A0A1B0GVB3 256 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 TRAPPC13A5PLN9 417 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 FAM171A2A8MVW0 826 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 FAM220BPB1ANY3 271 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 CHP2O43745 196 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 SNX3O60493 162 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 TPST2O60704 377 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 HIST1H2ABP04908 130 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 NQO1P15559 274 aaKnown RBP13.96□□□□□ -0.17
LMX1B-204ENST00000561065 PTAFRP25105 342 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 GZMMP51124 257 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 MNAT1P51948 309 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 SEC24CP53992 1094 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 GNGT1P63211 74 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 CLEC12BQ2HXU8 276 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 ENTPD8Q5MY95 495 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 KLHL24Q6TFL4 600 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 HIST3H2AQ7L7L0 130 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 DEPDC4Q8N2C3 294 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 SCAIQ8N9R8 606 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 HIST1H2ACQ93077 130 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 SLC19A3Q9BZV2 496 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 NELFAQ9H3P2 528 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 MOV10Q9HCE1 1003 aaKnown RBP13.96□□□□□ -0.17
LMX1B-204ENST00000561065 SH3GLB1Q9Y371 365 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 ARFGEF3Q5TH69 2177 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 ALPK2Q86TB3 2170 aa13.96□□□□□ -0.17
LMX1B-204ENST00000561065 HTR3EA5X5Y0 456 aa13.95□□□□□ -0.18
LMX1B-204ENST00000561065 UPK3AO75631 287 aa13.95□□□□□ -0.18
LMX1B-204ENST00000561065 DCTN3O75935 186 aa13.95□□□□□ -0.18
LMX1B-204ENST00000561065 OPN1SWP03999 348 aa13.95□□□□□ -0.18
LMX1B-204ENST00000561065 CDH2P19022 906 aaPredicted RBP13.95□□□□□ -0.18
LMX1B-204ENST00000561065 KDELR2P33947 212 aa13.95□□□□□ -0.18
LMX1B-204ENST00000561065 CDH12P55289 794 aa13.95□□□□□ -0.18
LMX1B-204ENST00000561065 NPTX1Q15818 432 aa13.95□□□□□ -0.18
LMX1B-204ENST00000561065 NIPAL3Q6P499 406 aa13.95□□□□□ -0.18
LMX1B-204ENST00000561065 SLC22A25Q6T423 547 aa13.95□□□□□ -0.18
LMX1B-204ENST00000561065 MICU2Q8IYU8 434 aa13.95□□□□□ -0.18
LMX1B-204ENST00000561065 POU5F2Q8N7G0 328 aa13.95□□□□□ -0.18
LMX1B-204ENST00000561065 ADPRHL1Q8NDY3 354 aa13.95□□□□□ -0.18
LMX1B-204ENST00000561065 ADAMTS16Q8TE57 1224 aa13.95□□□□□ -0.18
LMX1B-204ENST00000561065 TAAR8Q969N4 342 aa13.95□□□□□ -0.18
LMX1B-204ENST00000561065 HS6ST2Q96MM7 605 aa13.95□□□□□ -0.18
LMX1B-204ENST00000561065 LRRC37BQ96QE4 947 aa13.95□□□□□ -0.18
LMX1B-204ENST00000561065 GRIP2Q9C0E4 1043 aa13.95□□□□□ -0.18
LMX1B-204ENST00000561065 NDE1Q9NXR1 346 aa13.95□□□□□ -0.18
LMX1B-204ENST00000561065 MGAT4BQ9UQ53 548 aa13.95□□□□□ -0.18
LMX1B-204ENST00000561065 RCE1Q9Y256 329 aa13.95□□□□□ -0.18
LMX1B-204ENST00000561065 ARL2BPQ9Y2Y0 163 aa13.95□□□□□ -0.18
LMX1B-204ENST00000561065 AMDHD2Q9Y303 409 aa13.95□□□□□ -0.18
LMX1B-204ENST00000561065 SONP18583 2426 aaKnown RBP13.95□□□□□ -0.18
LMX1B-204ENST00000561065 INAFM1C9JVW0 142 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 RNF223E7ERA6 249 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 ZNF587BE7ETH6 402 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 ATP6V1G2-DDX39BF2Z307 99 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 M0R082 166 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 M0R3H8 397 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 FXYD1O00168 92 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 ZNF432O94892 652 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 WNT11O96014 354 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms