RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 RPS23P62266 143 aaKnown RBP15.9■□□□□ 0.14
TPM1-226ENST00000560959 PDCD2Q16342 344 aaPredicted RBP15.9■□□□□ 0.14
TPM1-226ENST00000560959 ZNF311Q5JNZ3 666 aa15.9■□□□□ 0.14
TPM1-226ENST00000560959 ZNF627Q7L945 461 aa15.9■□□□□ 0.14
TPM1-226ENST00000560959 PEX5LQ8IYB4 626 aa15.9■□□□□ 0.14
TPM1-226ENST00000560959 LRRC17Q8N6Y2 441 aa15.9■□□□□ 0.14
TPM1-226ENST00000560959 PIK3C3Q8NEB9 887 aa15.9■□□□□ 0.14
TPM1-226ENST00000560959 NANPQ8TBE9 248 aa15.9■□□□□ 0.14
TPM1-226ENST00000560959 ZNF837Q96EG3 531 aaPredicted RBP15.9■□□□□ 0.14
TPM1-226ENST00000560959 ZNF75AQ96N20 296 aa15.9■□□□□ 0.14
TPM1-226ENST00000560959 MECRQ9BV79 373 aa15.9■□□□□ 0.14
TPM1-226ENST00000560959 TMPRSS13Q9BYE2 586 aa15.9■□□□□ 0.14
TPM1-226ENST00000560959 BTNL2Q9UIR0 455 aa15.9■□□□□ 0.14
TPM1-226ENST00000560959 ZNF346Q9UL40 294 aaKnown RBP15.9■□□□□ 0.14
TPM1-226ENST00000560959 NOX1Q9Y5S8 564 aa15.9■□□□□ 0.14
TPM1-226ENST00000560959 A0A0G2JMP0 313 aa15.89■□□□□ 0.13
TPM1-226ENST00000560959 A0A0X1KG70 313 aa15.89■□□□□ 0.13
TPM1-226ENST00000560959 NUDT17P0C025 328 aa15.89■□□□□ 0.13
TPM1-226ENST00000560959 HKR1P10072 659 aa15.89■□□□□ 0.13
TPM1-226ENST00000560959 PNMTP11086 282 aa15.89■□□□□ 0.13
TPM1-226ENST00000560959 ZNF14P17017 642 aaPredicted RBP15.89■□□□□ 0.13
TPM1-226ENST00000560959 GATA3P23771 443 aa15.89■□□□□ 0.13
TPM1-226ENST00000560959 SEC24CP53992 1094 aa15.89■□□□□ 0.13
TPM1-226ENST00000560959 DEFA6Q01524 100 aa15.89■□□□□ 0.13
TPM1-226ENST00000560959 FXNQ16595 210 aa15.89■□□□□ 0.13
TPM1-226ENST00000560959 TRMT5Q32P41 509 aaKnown RBP15.89■□□□□ 0.13
TPM1-226ENST00000560959 RNF130Q86XS8 419 aa15.89■□□□□ 0.13
TPM1-226ENST00000560959 TRIML2Q8N7C3 387 aa15.89■□□□□ 0.13
TPM1-226ENST00000560959 OR4M2Q8NGB6 313 aa15.89■□□□□ 0.13
TPM1-226ENST00000560959 APOPT1Q96IL0 206 aa15.89■□□□□ 0.13
TPM1-226ENST00000560959 CCDC115Q96NT0 180 aa15.89■□□□□ 0.13
TPM1-226ENST00000560959 ZNF665Q9H7R5 613 aa15.89■□□□□ 0.13
TPM1-226ENST00000560959 ESM1Q9NQ30 184 aa15.89■□□□□ 0.13
TPM1-226ENST00000560959 RLIMQ9NVW2 624 aa15.89■□□□□ 0.13
TPM1-226ENST00000560959 B3GAT1Q9P2W7 334 aa15.89■□□□□ 0.13
TPM1-226ENST00000560959 AHSA1O95433 338 aa15.88■□□□□ 0.13
TPM1-226ENST00000560959 GKN3PP0CG01 181 aa15.88■□□□□ 0.13
TPM1-226ENST00000560959 NR2F1P10589 423 aa15.88■□□□□ 0.13
TPM1-226ENST00000560959 ALDH3B1P43353 468 aa15.88■□□□□ 0.13
TPM1-226ENST00000560959 CAPZA2P47755 286 aa15.88■□□□□ 0.13
TPM1-226ENST00000560959 UBA52P62987 128 aaKnown RBP15.88■□□□□ 0.13
TPM1-226ENST00000560959 GSG1Q2KHT4 349 aa15.88■□□□□ 0.13
TPM1-226ENST00000560959 LIN52Q52LA3 116 aa15.88■□□□□ 0.13
TPM1-226ENST00000560959 LSRQ86X29 649 aaPredicted RBP15.88■□□□□ 0.13
TPM1-226ENST00000560959 KDM8Q8N371 416 aa15.88■□□□□ 0.13
TPM1-226ENST00000560959 CADM2Q8N3J6 435 aa15.88■□□□□ 0.13
TPM1-226ENST00000560959 BPIFB2Q8N4F0 458 aa15.88■□□□□ 0.13
TPM1-226ENST00000560959 RAB39BQ96DA2 213 aa15.88■□□□□ 0.13
TPM1-226ENST00000560959 LRR1Q96L50 414 aa15.88■□□□□ 0.13
TPM1-226ENST00000560959 SYT3Q9BQG1 590 aa15.88■□□□□ 0.13
TPM1-226ENST00000560959 PTDSS2Q9BVG9 487 aa15.88■□□□□ 0.13
TPM1-226ENST00000560959 AKTIPQ9H8T0 292 aa15.88■□□□□ 0.13
TPM1-226ENST00000560959 DDX28Q9NUL7 540 aaKnown RBP15.88■□□□□ 0.13
TPM1-226ENST00000560959 DSPPQ9NZW4 1301 aa15.88■□□□□ 0.13
TPM1-226ENST00000560959 A0A0G2JK05 382 aa15.87■□□□□ 0.13
TPM1-226ENST00000560959 PLPP2O43688 288 aa15.87■□□□□ 0.13
TPM1-226ENST00000560959 AKAP8O43823 692 aaKnown RBP15.87■□□□□ 0.13
TPM1-226ENST00000560959 MPZL1O95297 269 aa15.87■□□□□ 0.13
TPM1-226ENST00000560959 FPR2P25090 351 aa15.87■□□□□ 0.13
TPM1-226ENST00000560959 CLNS1AP54105 237 aaKnown RBP15.87■□□□□ 0.13
TPM1-226ENST00000560959 TREML4Q6UXN2 200 aa15.87■□□□□ 0.13
TPM1-226ENST00000560959 LRRC34Q8IZ02 419 aa15.87■□□□□ 0.13
TPM1-226ENST00000560959 TMEM123Q8N131 208 aa15.87■□□□□ 0.13
TPM1-226ENST00000560959 OR52P1PQ8NH57 321 aa15.87■□□□□ 0.13
TPM1-226ENST00000560959 OR2M2Q96R28 347 aa15.87■□□□□ 0.13
TPM1-226ENST00000560959 SLC6A7Q99884 636 aa15.87■□□□□ 0.13
TPM1-226ENST00000560959 FBXL3Q9UKT7 428 aa15.87■□□□□ 0.13
TPM1-226ENST00000560959 CCDC154A6NI56 674 aa15.86■□□□□ 0.13
TPM1-226ENST00000560959 OR2T1O43869 369 aa15.86■□□□□ 0.13
TPM1-226ENST00000560959 DEAF1O75398 565 aaPredicted RBP15.86■□□□□ 0.13
TPM1-226ENST00000560959 NCR1O76036 304 aa15.86■□□□□ 0.13
TPM1-226ENST00000560959 HLA-HP01893 362 aa15.86■□□□□ 0.13
TPM1-226ENST00000560959 CD79AP11912 226 aa15.86■□□□□ 0.13
TPM1-226ENST00000560959 GTF2E2P29084 291 aaKnown RBP15.86■□□□□ 0.13
TPM1-226ENST00000560959 GALK2Q01415 458 aa15.86■□□□□ 0.13
TPM1-226ENST00000560959 LRRC74AQ0VAA2 488 aa15.86■□□□□ 0.13
TPM1-226ENST00000560959 C1DQ13901 141 aaKnown RBP15.86■□□□□ 0.13
TPM1-226ENST00000560959 TUSC1Q2TAM9 212 aa15.86■□□□□ 0.13
TPM1-226ENST00000560959 SPANXN4Q5MJ08 99 aa15.86■□□□□ 0.13
TPM1-226ENST00000560959 GKAP1Q5VSY0 366 aaPredicted RBP15.86■□□□□ 0.13
TPM1-226ENST00000560959 RNF220Q5VTB9 566 aa15.86■□□□□ 0.13
TPM1-226ENST00000560959 NET1Q7Z628 596 aaPredicted RBP15.86■□□□□ 0.13
TPM1-226ENST00000560959 LRP11Q86VZ4 500 aa15.86■□□□□ 0.13
TPM1-226ENST00000560959 EPS8L3Q8TE67 593 aaKnown RBP15.86■□□□□ 0.13
TPM1-226ENST00000560959 SLC25A36Q96CQ1 311 aa15.86■□□□□ 0.13
TPM1-226ENST00000560959 MS4A3Q96HJ5 214 aa15.86■□□□□ 0.13
TPM1-226ENST00000560959 ARMC7Q9H6L4 198 aa15.86■□□□□ 0.13
TPM1-226ENST00000560959 NKIRAS2Q9NYR9 191 aa15.86■□□□□ 0.13
TPM1-226ENST00000560959 CALML5Q9NZT1 146 aa15.86■□□□□ 0.13
TPM1-226ENST00000560959 SLC17A7Q9P2U7 560 aa15.86■□□□□ 0.13
TPM1-226ENST00000560959 GPR160Q9UJ42 338 aa15.86■□□□□ 0.13
TPM1-226ENST00000560959 SMIM23A6NLE4 172 aa15.85■□□□□ 0.13
TPM1-226ENST00000560959 AIM2O14862 343 aa15.85■□□□□ 0.13
TPM1-226ENST00000560959 FSHBP01225 129 aa15.85■□□□□ 0.13
TPM1-226ENST00000560959 C1QCP02747 245 aa15.85■□□□□ 0.13
TPM1-226ENST00000560959 ADRA2CP18825 462 aa15.85■□□□□ 0.13
TPM1-226ENST00000560959 NCF2P19878 526 aaPredicted RBP15.85■□□□□ 0.13
TPM1-226ENST00000560959 S100A3P33764 101 aa15.85■□□□□ 0.13
TPM1-226ENST00000560959 TEKQ02763 1124 aa15.85■□□□□ 0.13
TPM1-226ENST00000560959 EGR4Q05215 589 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms