RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 CDC123O75794 336 aaPredicted RBP6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 DIRAS1O95057 198 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 ZNF682O95780 498 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 PPP3CBP16298 524 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 HNF1AP20823 631 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 PTNP21246 168 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 HTR6P50406 440 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 KIAA0040Q15053 153 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 HSPB2Q16082 182 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 CSRP2Q16527 193 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 MARCH8Q5T0T0 291 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 FBXO42Q6P3S6 717 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 ASB18Q6ZVZ8 466 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 DPPA2Q7Z7J5 298 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 NAA40Q86UY6 237 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 MISPQ8IVT2 679 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 ARMC10Q8N2F6 343 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 SLC44A3Q8N4M1 653 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 OR52P1PQ8NH57 321 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 OR52J3Q8NH60 311 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 LINC01599Q8WXQ3 324 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 RFT1Q96AA3 541 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 MRPL45Q9BRJ2 306 aaKnown RBP6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 C2orf88Q9BSF0 95 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 ALKBH7Q9BT30 221 aaPredicted RBP6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 SF3B5Q9BWJ5 86 aaKnown RBP6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 ACTL8Q9H568 366 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 EXOSC3Q9NQT5 275 aaKnown RBP6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 MTCH1Q9NZJ7 389 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 RCOR3Q9P2K3 495 aaPredicted RBP6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 CHST2Q9Y4C5 530 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 TRPM7Q96QT4 1865 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 AP4M1O00189 453 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 HCRTR2O43614 444 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 TBX19O60806 448 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 ICOSLGO75144 302 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 WISP3O95389 354 aaPredicted RBP6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 ZGLP1P0C6A0 271 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 RAB4AP20338 218 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 NPR2P20594 1047 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 ARL4AP40617 200 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 CDH4P55283 916 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 VLDLRP98155 873 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 BDH1Q02338 343 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 DCAF4L1Q3SXM0 396 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 TMEM41BQ5BJD5 291 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 LIPKQ5VXJ0 399 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 SLC22A10Q63ZE4 541 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 CYB5R2Q6BCY4 276 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 IL20RBQ6UXL0 311 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 ETV3LQ6ZN32 361 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 C19orf35Q6ZS72 473 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 BIVMQ86UB2 503 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 GALNT16Q8N428 558 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 FADS6Q8N9I5 356 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 NETO2Q8NC67 525 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 THAP6Q8TBB0 222 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 HSD17B8Q92506 261 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 EDAQ92838 391 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 IGSF8Q969P0 613 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 MS4A4EQ96PG1 132 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 MYADMQ96S97 322 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 ATF6BQ99941 703 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 THAP7Q9BT49 309 aaPredicted RBP6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 RRAGCQ9HB90 399 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 HIF1ANQ9NWT6 349 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 SLC22A14Q9Y267 594 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 DHRS7Q9Y394 339 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 RHBDD3Q9Y3P4 386 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 TRBV2A0A0J9YWF9 115 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 SLC19A2O60779 497 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 SEMA7AO75326 666 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 MOCS2O96007 188 aaPredicted RBP6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 TFP02787 698 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 CDAP32320 146 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 GPR4P46093 362 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 AVPR1BP47901 424 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 RBP2P50120 134 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 TIAL1Q01085 375 aaKnown RBP eCLIP6.14□□□□□ -1.439e-7■□□□□ 9.8
TSPAN3-209ENST00000560715 FABP9Q0Z7S8 132 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 TMEM132DQ14C87 1099 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 HACD4Q5VWC8 232 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 RPL13AP3Q6NVV1 102 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 FIGLAQ6QHK4 219 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 GSG1LQ6UXU4 331 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 TMUB2Q71RG4 321 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 TECPR1Q7Z6L1 1165 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 IZUMO1Q8IYV9 350 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 GPR26Q8NDV2 337 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 MDGA1Q8NFP4 955 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 CA5BP1Q8WTZ4 195 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 TM9SF4Q92544 642 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 TADA1Q96BN2 335 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 CDKN2AIPNLQ96HQ2 116 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 GGACTQ9BVM4 153 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 C1QTNF3Q9BXJ4 246 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 POLR2J2Q9GZM3 115 aaKnown RBP6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 SPRTNQ9H040 489 aaPredicted RBP6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 TMPRSS5Q9H3S3 457 aa6.14□□□□□ -1.43
TSPAN3-209ENST00000560715 TMEM248Q9NWD8 314 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms