RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 UPK3AO75631 287 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 DCTN3O75935 186 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 WNT11O96014 354 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 THY1P04216 161 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 HLA-DOBP13765 273 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 PRDX6P30041 224 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 GSK3BP49841 420 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 UBE2NP61088 152 aaKnown RBP11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 PSME3P61289 254 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 SELENOWP63302 87 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 NKX6-1P78426 367 aaPredicted RBP11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 MXRA7P84157 204 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 ROR2Q01974 943 aaKnown RBP11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 LTBQ06643 244 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 PIN1Q13526 163 aaPredicted RBP11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 MS4A18Q3C1V0 323 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 HIKESHIQ53FT3 197 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 PRR14LQ5THK1 2151 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 SLC22A25Q6T423 547 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 LINC00114Q6XXX2 140 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 HACD2Q6Y1H2 254 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 TSPYL5Q86VY4 417 aaPredicted RBP11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 DEPDC4Q8N2C3 294 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 C17orf78Q8N4C9 275 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 ZNF611Q8N823 705 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 ADPRHL1Q8NDY3 354 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 KBTBD8Q8NFY9 601 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 OR5J2Q8NH18 312 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 FAM162AQ96A26 154 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 PERPQ96FX8 193 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 LRRC37BQ96QE4 947 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 TMEM204Q9BSN7 226 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 EMC6Q9BV81 110 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 PCDHAC1Q9H158 963 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 CXXC4Q9H2H0 198 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 SPAG4Q9NPE6 437 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 SLC17A5Q9NRA2 495 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 MED29Q9NX70 200 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 MRPL39Q9NYK5 338 aaKnown RBP11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 NPAP1Q9NZP6 1156 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 B3GAT1Q9P2W7 334 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 RIMS3Q9UJD0 308 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 LAMP3Q9UQV4 416 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 NOX1Q9Y5S8 564 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 MAGED1Q9Y5V3 778 aaPredicted RBP11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 SLC25A15Q9Y619 301 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 CELSR1Q9NYQ6 3014 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 DSCAMO60469 2012 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 A0A096LPE4 126 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 A0A1W2PPZ6 126 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 M0R3G1 203 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 PLPP3O14495 311 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 ARHGEF9O43307 516 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 OR5F1O95221 314 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 HPRP00739 348 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 SERPINA1P01009 418 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 IFNW1P05000 195 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 CD99P14209 185 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 NCK1P16333 377 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 YAP1P46937 504 aaKnown RBP11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 ZNF74Q16587 644 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 NANOGNBQ7Z5D8 188 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 VTCN1Q7Z7D3 282 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 NKAIN4Q8IVV8 208 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 OR6N1Q8NGY5 312 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 TMEM255BQ8WV15 326 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 NEUROG1Q92886 237 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 RADILQ96JH8 1075 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 OR2M2Q96R28 347 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 LINC00470Q9BZP3 86 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 SLC19A3Q9BZV2 496 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 POLR2J2Q9GZM3 115 aaKnown RBP11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 POLR2J3Q9H1A7 115 aaKnown RBP11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 CXorf56Q9H5V9 222 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 FKRPQ9H9S5 495 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 CRLF2Q9HC73 371 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 B3GAT2Q9NPZ5 323 aa11.38□□□□□ -0.59
CTDSPL2-209ENST00000560620 PRRC2AP48634 2157 aaKnown RBP11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 LOC102725191A0A1B0GVB3 256 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 SLC35F4A4IF30 521 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 BLOC1S5-TXNDC5H3BN57 136 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 TRAF3IP2O43734 574 aaPredicted RBP11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 LYPD3O95274 346 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 MT-ND1P03886 318 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 TCN1P20061 433 aaPredicted RBP11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 PTAFRP25105 342 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 CAPZA2P47755 286 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 CDH11P55287 796 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 BIDP55957 195 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 ADAM8P78325 824 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 ST3GAL3Q11203 375 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 CAMK2DQ13557 499 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 CEACAM16Q2WEN9 425 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 TBRG1Q3YBR2 411 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 ZNF672Q499Z4 452 aaPredicted RBP11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 SEZ6L2Q6UXD5 910 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 LINGO2Q7L985 606 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 PXKQ7Z7A4 578 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 TGIF2LYQ8IUE0 185 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 LRRC17Q8N6Y2 441 aa11.37□□□□□ -0.59
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