RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 ZNF43P17038 809 aa15.3■□□□□ 0.04
TSPAN3-208ENST00000560514 ADRA2CP18825 462 aa15.3■□□□□ 0.04
TSPAN3-208ENST00000560514 UQCRC2P22695 453 aa15.3■□□□□ 0.04
TSPAN3-208ENST00000560514 COPZ1P61923 177 aa15.3■□□□□ 0.04
TSPAN3-208ENST00000560514 FUT5Q11128 374 aa15.3■□□□□ 0.04
TSPAN3-208ENST00000560514 EPS8Q12929 822 aa15.3■□□□□ 0.04
TSPAN3-208ENST00000560514 LSRQ86X29 649 aaPredicted RBP15.3■□□□□ 0.04
TSPAN3-208ENST00000560514 TREML1Q86YW5 311 aa15.3■□□□□ 0.04
TSPAN3-208ENST00000560514 EPHX4Q8IUS5 362 aa15.3■□□□□ 0.04
TSPAN3-208ENST00000560514 ZNF440Q8IYI8 595 aa15.3■□□□□ 0.04
TSPAN3-208ENST00000560514 LRRC34Q8IZ02 419 aa15.3■□□□□ 0.04
TSPAN3-208ENST00000560514 CADM2Q8N3J6 435 aa15.3■□□□□ 0.04
TSPAN3-208ENST00000560514 VPS37AQ8NEZ2 397 aa15.3■□□□□ 0.04
TSPAN3-208ENST00000560514 MGARPQ8TDB4 240 aa15.3■□□□□ 0.04
TSPAN3-208ENST00000560514 YIPF5Q969M3 257 aa15.3■□□□□ 0.04
TSPAN3-208ENST00000560514 ZNF665Q9H7R5 613 aa15.3■□□□□ 0.04
TSPAN3-208ENST00000560514 NOP53Q9NZM5 478 aaKnown RBP15.3■□□□□ 0.04
TSPAN3-208ENST00000560514 MARCOQ9UEW3 520 aaPredicted RBP15.3■□□□□ 0.04
TSPAN3-208ENST00000560514 ZNF346Q9UL40 294 aaKnown RBP15.3■□□□□ 0.04
TSPAN3-208ENST00000560514 TRRAPQ9Y4A5 3859 aa15.29■□□□□ 0.04
TSPAN3-208ENST00000560514 RPL36A-HNRNPH2H7BZ11 118 aa15.29■□□□□ 0.04
TSPAN3-208ENST00000560514 ZNF432O94892 652 aa15.29■□□□□ 0.04
TSPAN3-208ENST00000560514 MYZAPP0CAP1 466 aa15.29■□□□□ 0.04
TSPAN3-208ENST00000560514 G6PDP11413 515 aa15.29■□□□□ 0.04
TSPAN3-208ENST00000560514 GLRXP35754 106 aa15.29■□□□□ 0.04
TSPAN3-208ENST00000560514 SEC24CP53992 1094 aa15.29■□□□□ 0.04
TSPAN3-208ENST00000560514 PLAURQ03405 335 aa15.29■□□□□ 0.04
TSPAN3-208ENST00000560514 BNIP2Q12982 314 aa15.29■□□□□ 0.04
TSPAN3-208ENST00000560514 CEACAM16Q2WEN9 425 aa15.29■□□□□ 0.04
TSPAN3-208ENST00000560514 GLIPR1L2Q4G1C9 344 aa15.29■□□□□ 0.04
TSPAN3-208ENST00000560514 C1orf140Q5VVS0 124 aa15.29■□□□□ 0.04
TSPAN3-208ENST00000560514 OR8J2Q8NGG1 315 aa15.29■□□□□ 0.04
TSPAN3-208ENST00000560514 TMPRSS13Q9BYE2 586 aa15.29■□□□□ 0.04
TSPAN3-208ENST00000560514 ZNF385DQ9H6B1 395 aa15.29■□□□□ 0.04
TSPAN3-208ENST00000560514 GPR35Q9HC97 309 aa15.29■□□□□ 0.04
TSPAN3-208ENST00000560514 DUSP13Q9UII6 198 aa15.29■□□□□ 0.04
TSPAN3-208ENST00000560514 RCE1Q9Y256 329 aa15.29■□□□□ 0.04
TSPAN3-208ENST00000560514 AGAP5A6NIR3 686 aa15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 TM9SF1O15321 606 aa15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 FRS3O43559 492 aa15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 PLPP2O43688 288 aa15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 PRSS23O95084 383 aa15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 AHSA1O95433 338 aa15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 SERPINE1P05121 402 aa15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 ARAFP10398 606 aa15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 CD79AP11912 226 aa15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 LSP1P33241 339 aa15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 ANXA11P50995 505 aaKnown RBP15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 P2RY4P51582 365 aa15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 C1DQ13901 141 aaKnown RBP15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 MAD2L1BPQ15013 274 aaPredicted RBP15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 GSG1Q2KHT4 349 aa15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 MRPL2Q5T653 305 aaKnown RBP15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 ANXA8L1Q5VT79 327 aa15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 ANKRD46Q86W74 232 aa15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 C22orf15Q8WYQ4 148 aa15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 SLC25A36Q96CQ1 311 aa15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 C7orf69Q9H7B7 122 aa15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 UNKLQ9H9P5 680 aaKnown RBP15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 GPR160Q9UJ42 338 aa15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 RAP2CQ9Y3L5 183 aa15.28■□□□□ 0.04
TSPAN3-208ENST00000560514 ZNF503-AS2A6NEH8 195 aa15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 ZNF99A8MXY4 864 aaPredicted RBP15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 RGS16O15492 202 aaPredicted RBP15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 AKAP8O43823 692 aaKnown RBP15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 DBIP07108 87 aaKnown RBP15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 TFPTP0C1Z6 253 aa15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 NAT2P11245 290 aa15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 GATA3P23771 443 aa15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 SELENOVP59797 346 aa15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 ABCE1P61221 599 aaKnown RBP15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 MVKQ03426 396 aa15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 ZP4Q12836 540 aa15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 NKPD1Q17RQ9 610 aa15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 SAXO2Q658L1 398 aa15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 WBP2NLQ6ICG8 309 aa15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 CROCCP2Q86T23 111 aa15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 PEX5LQ8IYB4 626 aa15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 KDM8Q8N371 416 aa15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 PIK3C3Q8NEB9 887 aa15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 TRNT1Q96Q11 434 aaKnown RBP15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 AKTIPQ9H8T0 292 aa15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 MTHFD2LQ9H903 347 aaPredicted RBP15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 PRDM4Q9UKN5 801 aa15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 FZR1Q9UM11 496 aa15.27■□□□□ 0.04
TSPAN3-208ENST00000560514 A0A096LPI6 279 aa15.26■□□□□ 0.03
TSPAN3-208ENST00000560514 PRSS51A0A1B0GVH4 220 aa15.26■□□□□ 0.03
TSPAN3-208ENST00000560514 CDC14BO60729 498 aa15.26■□□□□ 0.03
TSPAN3-208ENST00000560514 SEC14L2O76054 403 aa15.26■□□□□ 0.03
TSPAN3-208ENST00000560514 HLA-HP01893 362 aa15.26■□□□□ 0.03
TSPAN3-208ENST00000560514 NCF2P19878 526 aaPredicted RBP15.26■□□□□ 0.03
TSPAN3-208ENST00000560514 RAD52P43351 418 aa15.26■□□□□ 0.03
TSPAN3-208ENST00000560514 RPL14P50914 215 aaKnown RBP15.26■□□□□ 0.03
TSPAN3-208ENST00000560514 TEKQ02763 1124 aa15.26■□□□□ 0.03
TSPAN3-208ENST00000560514 SYPL1Q16563 259 aa15.26■□□□□ 0.03
TSPAN3-208ENST00000560514 MSMPQ1L6U9 139 aa15.26■□□□□ 0.03
TSPAN3-208ENST00000560514 MMEL1Q495T6 779 aa15.26■□□□□ 0.03
TSPAN3-208ENST00000560514 AVPI1Q5T686 147 aa15.26■□□□□ 0.03
TSPAN3-208ENST00000560514 LRRC74BQ6ZQY2 392 aa15.26■□□□□ 0.03
TSPAN3-208ENST00000560514 ANKFN1Q8N957 763 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms