RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 LUZP2Q86TE4 346 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 DMRTC2Q8IXT2 367 aaPredicted RBP12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 TMEM239Q8WW34 195 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 TAAR8Q969N4 342 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 ZNF347Q96SE7 839 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 PRSS27Q9BQR3 290 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 HDHD5Q9BXW7 423 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 NPDC1Q9NQX5 325 aaPredicted RBP12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 VNN3Q9NY84 501 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 MRPL39Q9NYK5 338 aaKnown RBP12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 KCNN3Q9UGI6 736 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 ZNF229Q9UJW7 825 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 NOSIPQ9Y314 301 aaKnown RBP12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 MED31Q9Y3C7 131 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 MAGED1Q9Y5V3 778 aaPredicted RBP12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 IGHV3-15A0A0B4J1V0 119 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 A0A1W2PRQ8 180 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 A6NHS1 94 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 MRPL33O75394 65 aaKnown RBP12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 THY1P04216 161 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 ALPLP05186 524 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 FABP3P05413 133 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 POU2F1P14859 743 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 TNFRSF1BP20333 461 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 UQCRC1P31930 480 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 P2RY4P51582 365 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 MYBPC1Q00872 1141 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 DGCR6Q14129 220 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 ZNF74Q16587 644 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 ANKDD1AQ495B1 522 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 SLC36A3Q495N2 470 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 OR2T5Q6IEZ7 315 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 TMEM99Q8N816 258 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 OR2T29Q8NH02 315 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 LIPHQ8WWY8 451 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 SLC25A36Q96CQ1 311 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 CNBD2Q96M20 576 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 OXGR1Q96P68 337 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 ZNF300Q96RE9 604 aaPredicted RBP12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 ADI1Q9BV57 179 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 OSBPL10Q9BXB5 764 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 KRCC1Q9NPI7 259 aaPredicted RBP12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 NANSQ9NR45 359 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 GALNT8Q9NY28 637 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 SMPD3Q9NY59 655 aaPredicted RBP12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 NDRG3Q9UGV2 375 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 CLEC4AQ9UMR7 237 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 RCE1Q9Y256 329 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 FLVCR1Q9Y5Y0 555 aa12.42□□□□□ -0.42
PKNOX1-209ENST00000560448 PTPN13Q12923 2485 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 G3V2T6 193 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 GNGT2O14610 69 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 BGLAPP02818 100 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 HIST1H2ABP04908 130 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 ZNF43P17038 809 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 PSMB1P20618 241 aaKnown RBP12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 ADARB1P78563 741 aaKnown RBP12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 PPP2R2BQ00005 443 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 WDR88Q6ZMY6 472 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 Q6ZT83 130 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 HIST3H2AQ7L7L0 130 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 ABHD12BQ7Z5M8 362 aaPredicted RBP12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 TSPYL5Q86VY4 417 aaPredicted RBP12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 ZDHHC13Q8IUH4 622 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 CCDC103Q8IW40 242 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 ZNF610Q8N9Z0 462 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 PIK3C3Q8NEB9 887 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 OR9K2Q8NGE7 335 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 OR5J2Q8NH18 312 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 MAGEE2Q8TD90 523 aaPredicted RBP12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 ACOT11Q8WXI4 607 aaPredicted RBP12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 HIST1H2ACQ93077 130 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 APH1AQ96BI3 265 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 GABARAPL1Q9H0R8 117 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 NDUFAF4Q9P032 175 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 MALT1Q9UDY8 824 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 SCOCQ9UIL1 159 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 GPR52Q9Y2T5 361 aa12.41□□□□□ -0.42
PKNOX1-209ENST00000560448 TUBAL3A6NHL2 446 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 C16orf97H3BN30 126 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 hCG_2039718K7EN88 272 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 M0R082 166 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 SNAP29O95721 258 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 MYF6P23409 242 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 GRNP28799 593 aaKnown RBP12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 GRPRP30550 384 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 CAPGP40121 348 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 PUDPQ08623 228 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 ZP4Q12836 540 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 PMS2P3Q13401 168 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 SHQ1Q6PI26 577 aaKnown RBP12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 ZNF474Q6S9Z5 364 aaPredicted RBP12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 MEX3BQ6ZN04 569 aaKnown RBP12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 USP51Q70EK9 711 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 CREB3L2Q70SY1 520 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 RRM2BQ7LG56 351 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 PXKQ7Z7A4 578 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 GPAT4Q86UL3 456 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 HIPK1Q86Z02 1210 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 ZNF100Q8IYN0 542 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms