RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ZNF417Q8TAU3 575 aa12.31□□□□□ -0.44
TPM1-223ENST00000560445 SLC26A7Q8TE54 656 aa12.31□□□□□ -0.44
TPM1-223ENST00000560445 FAM168AQ92567 244 aa12.31□□□□□ -0.44
TPM1-223ENST00000560445 ANKRD27Q96NW4 1050 aa12.31□□□□□ -0.44
TPM1-223ENST00000560445 ZNF587Q96SQ5 575 aaPredicted RBP12.31□□□□□ -0.44
TPM1-223ENST00000560445 CPPED1Q9BRF8 314 aaPredicted RBP12.31□□□□□ -0.44
TPM1-223ENST00000560445 C1QTNF6Q9BXI9 259 aa12.31□□□□□ -0.44
TPM1-223ENST00000560445 KLHL14Q9P2G3 628 aa12.31□□□□□ -0.44
TPM1-223ENST00000560445 FN1P02751 2386 aaKnown RBP12.3□□□□□ -0.44
TPM1-223ENST00000560445 A0A0B4J2E0 115 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 A0A1B0GX12 115 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 ZNF726A6NNF4 738 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 ATP6V1G2-DDX39BF2Z307 99 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 NDUFS8O00217 210 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 IFNA2P01563 188 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 AQP1P29972 269 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 GRPRP30550 384 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 HOXC5Q00444 222 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 EGR4Q05215 589 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 SPOCK1Q08629 439 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 PMS2P3Q13401 168 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 CYLC2Q14093 348 aaPredicted RBP12.3□□□□□ -0.44
TPM1-223ENST00000560445 OR1Q1Q15612 314 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 RUNDC3AQ59EK9 446 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 DNM1P46Q6ZS02 220 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 BCL2L2Q92843 193 aaPredicted RBP12.3□□□□□ -0.44
TPM1-223ENST00000560445 TAAR8Q969N4 342 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 THOC1Q96FV9 657 aaKnown RBP12.3□□□□□ -0.44
TPM1-223ENST00000560445 MPP4Q96JB8 637 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 LRR1Q96L50 414 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 CGREF1Q99674 301 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 SLC19A3Q9BZV2 496 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 DENND2DQ9H6A0 471 aaPredicted RBP12.3□□□□□ -0.44
TPM1-223ENST00000560445 NPHS2Q9NP85 383 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 SLC52A3Q9NQ40 469 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 MRPL39Q9NYK5 338 aaKnown RBP12.3□□□□□ -0.44
TPM1-223ENST00000560445 CRNNQ9UBG3 495 aaPredicted RBP12.3□□□□□ -0.44
TPM1-223ENST00000560445 USP22Q9UPT9 525 aa12.3□□□□□ -0.44
TPM1-223ENST00000560445 A0A0G2JND7 137 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 ZNF99A8MXY4 864 aaPredicted RBP12.29□□□□□ -0.44
TPM1-223ENST00000560445 B9A039 149 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 INAFM1C9JVW0 142 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 CHP2O43745 196 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 CD5LO43866 347 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 EDF1O60869 148 aaKnown RBP12.29□□□□□ -0.44
TPM1-223ENST00000560445 ZNF432O94892 652 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 MFN2O95140 757 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 NPPAP01160 153 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 IFNA14P01570 189 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 HTR2AP28223 471 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 LSP1P33241 339 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 PCGF2P35227 344 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 SERPINF1P36955 418 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 FOXG1P55316 489 aaPredicted RBP12.29□□□□□ -0.44
TPM1-223ENST00000560445 PUDPQ08623 228 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 HSP90B2PQ58FF3 399 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 COQ5Q5HYK3 327 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 DLEU7Q6UYE1 221 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 SLC46A3Q7Z3Q1 461 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 HDDC2Q7Z4H3 204 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 PXKQ7Z7A4 578 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 ZNF540Q8NDQ6 660 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 PROX1Q92786 737 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 SLC41A3Q96GZ6 507 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 CRLF2Q9HC73 371 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 GPR35Q9HC97 309 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 CA10Q9NS85 328 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 SLAMF8Q9P0V8 285 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 GDF2Q9UK05 429 aaPredicted RBP12.29□□□□□ -0.44
TPM1-223ENST00000560445 MOKQ9UQ07 419 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 SPEF1Q9Y4P9 236 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 ZANQ9Y493 2812 aa12.29□□□□□ -0.44
TPM1-223ENST00000560445 IGHV1-18A0A0C4DH31 117 aa12.28□□□□□ -0.44
TPM1-223ENST00000560445 BBIP1A8MTZ0 92 aa12.28□□□□□ -0.44
TPM1-223ENST00000560445 CRLF1O75462 422 aa12.28□□□□□ -0.44
TPM1-223ENST00000560445 UPK3AO75631 287 aa12.28□□□□□ -0.44
TPM1-223ENST00000560445 IGLV1-44P01699 117 aa12.28□□□□□ -0.44
TPM1-223ENST00000560445 HIST1H2ABP04908 130 aa12.28□□□□□ -0.44
TPM1-223ENST00000560445 CBR1P16152 277 aa12.28□□□□□ -0.44
TPM1-223ENST00000560445 PCBP3P57721 371 aaKnown RBP12.28□□□□□ -0.44
TPM1-223ENST00000560445 ARF1P84077 181 aaKnown RBP12.28□□□□□ -0.44
TPM1-223ENST00000560445 SLC25A3Q00325 362 aa12.28□□□□□ -0.44
TPM1-223ENST00000560445 NAAAQ02083 359 aa12.28□□□□□ -0.44
TPM1-223ENST00000560445 POU3F1Q03052 451 aaPredicted RBP12.28□□□□□ -0.44
TPM1-223ENST00000560445 LOXL1Q08397 574 aaPredicted RBP12.28□□□□□ -0.44
TPM1-223ENST00000560445 TRMT5Q32P41 509 aaKnown RBP12.28□□□□□ -0.44
TPM1-223ENST00000560445 B3GLCTQ6Y288 498 aa12.28□□□□□ -0.44
TPM1-223ENST00000560445 HIST3H2AQ7L7L0 130 aa12.28□□□□□ -0.44
TPM1-223ENST00000560445 NUP37Q8NFH4 326 aa12.28□□□□□ -0.44
TPM1-223ENST00000560445 OR10H5Q8NGA6 315 aa12.28□□□□□ -0.44
TPM1-223ENST00000560445 OR6N1Q8NGY5 312 aa12.28□□□□□ -0.44
TPM1-223ENST00000560445 HIST1H2ACQ93077 130 aa12.28□□□□□ -0.44
TPM1-223ENST00000560445 OR2M2Q96R28 347 aa12.28□□□□□ -0.44
TPM1-223ENST00000560445 MCHR1Q99705 422 aa12.28□□□□□ -0.44
TPM1-223ENST00000560445 POLR2J2Q9GZM3 115 aaKnown RBP12.28□□□□□ -0.44
TPM1-223ENST00000560445 POLR2J3Q9H1A7 115 aaKnown RBP12.28□□□□□ -0.44
TPM1-223ENST00000560445 ZNF442Q9H7R0 627 aa12.28□□□□□ -0.44
TPM1-223ENST00000560445 B3GAT1Q9P2W7 334 aa12.28□□□□□ -0.44
TPM1-223ENST00000560445 BAG5Q9UL15 447 aa12.28□□□□□ -0.44
TPM1-223ENST00000560445 POFUT2Q9Y2G5 429 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms