RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 TGFBR3Q03167 851 aa13.32□□□□□ -0.28
SNRPA1-210ENST00000560383 STK11Q15831 433 aa13.32□□□□□ -0.28
SNRPA1-210ENST00000560383 MS4A18Q3C1V0 323 aa13.32□□□□□ -0.28
SNRPA1-210ENST00000560383 WDR88Q6ZMY6 472 aa13.32□□□□□ -0.28
SNRPA1-210ENST00000560383 CARM1Q86X55 608 aa13.32□□□□□ -0.28
SNRPA1-210ENST00000560383 CIARTQ8N365 385 aaPredicted RBP13.32□□□□□ -0.28
SNRPA1-210ENST00000560383 KDM8Q8N371 416 aa13.32□□□□□ -0.28
SNRPA1-210ENST00000560383 WDR31Q8NA23 367 aa13.32□□□□□ -0.28
SNRPA1-210ENST00000560383 ANKK1Q8NFD2 765 aa13.32□□□□□ -0.28
SNRPA1-210ENST00000560383 LILRB1Q8NHL6 650 aaPredicted RBP13.32□□□□□ -0.28
SNRPA1-210ENST00000560383 MOGAT1Q96PD6 335 aa13.32□□□□□ -0.28
SNRPA1-210ENST00000560383 SLC19A3Q9BZV2 496 aa13.32□□□□□ -0.28
SNRPA1-210ENST00000560383 POLR2J2Q9GZM3 115 aaKnown RBP13.32□□□□□ -0.28
SNRPA1-210ENST00000560383 POLR2J3Q9H1A7 115 aaKnown RBP13.32□□□□□ -0.28
SNRPA1-210ENST00000560383 MRPL39Q9NYK5 338 aaKnown RBP13.32□□□□□ -0.28
SNRPA1-210ENST00000560383 NPAP1Q9NZP6 1156 aa13.32□□□□□ -0.28
SNRPA1-210ENST00000560383 RNF115Q9Y4L5 304 aa13.32□□□□□ -0.28
SNRPA1-210ENST00000560383 TLN2Q9Y4G6 2542 aa13.32□□□□□ -0.28
SNRPA1-210ENST00000560383 NME4O00746 187 aa13.31□□□□□ -0.28
SNRPA1-210ENST00000560383 TRAF3IP2O43734 574 aaPredicted RBP13.31□□□□□ -0.28
SNRPA1-210ENST00000560383 LY6G6DO95868 133 aa13.31□□□□□ -0.28
SNRPA1-210ENST00000560383 CD3EP07766 207 aa13.31□□□□□ -0.28
SNRPA1-210ENST00000560383 RPS4XP62701 263 aaKnown RBP13.31□□□□□ -0.28
SNRPA1-210ENST00000560383 BSPH1Q075Z2 132 aa13.31□□□□□ -0.28
SNRPA1-210ENST00000560383 ETFDHQ16134 617 aa13.31□□□□□ -0.28
SNRPA1-210ENST00000560383 CYBRD1Q53TN4 286 aa13.31□□□□□ -0.28
SNRPA1-210ENST00000560383 ALKBH2Q6NS38 261 aa13.31□□□□□ -0.28
SNRPA1-210ENST00000560383 Q71RC1 249 aaPredicted RBP13.31□□□□□ -0.28
SNRPA1-210ENST00000560383 ABHD12BQ7Z5M8 362 aaPredicted RBP13.31□□□□□ -0.28
SNRPA1-210ENST00000560383 CPLX4Q7Z7G2 160 aa13.31□□□□□ -0.28
SNRPA1-210ENST00000560383 RNF217Q8TC41 542 aa13.31□□□□□ -0.28
SNRPA1-210ENST00000560383 AKAP1Q92667 903 aaKnown RBP eCLIP13.31□□□□□ -0.28
SNRPA1-210ENST00000560383 FBXW5Q969U6 566 aa13.31□□□□□ -0.28
SNRPA1-210ENST00000560383 CMTM5Q96DZ9 223 aa13.31□□□□□ -0.28
SNRPA1-210ENST00000560383 PRSS27Q9BQR3 290 aa13.31□□□□□ -0.28
SNRPA1-210ENST00000560383 ASPNQ9BXN1 380 aa13.31□□□□□ -0.28
SNRPA1-210ENST00000560383 ABCD2Q9UBJ2 740 aa13.31□□□□□ -0.28
SNRPA1-210ENST00000560383 SH3GLB1Q9Y371 365 aa13.31□□□□□ -0.28
SNRPA1-210ENST00000560383 TRIM64A6NGJ6 449 aa13.3□□□□□ -0.28
SNRPA1-210ENST00000560383 TRIM64BA6NI03 449 aa13.3□□□□□ -0.28
SNRPA1-210ENST00000560383 RPL36A-HNRNPH2H7BZ11 118 aa13.3□□□□□ -0.28
SNRPA1-210ENST00000560383 NDUFAB1O14561 156 aa13.3□□□□□ -0.28
SNRPA1-210ENST00000560383 OR5F1O95221 314 aa13.3□□□□□ -0.28
SNRPA1-210ENST00000560383 HPRP00739 348 aa13.3□□□□□ -0.28
SNRPA1-210ENST00000560383 SLC7A2P52569 658 aa13.3□□□□□ -0.28
SNRPA1-210ENST00000560383 GYS2P54840 703 aa13.3□□□□□ -0.28
SNRPA1-210ENST00000560383 CLDN17P56750 224 aa13.3□□□□□ -0.28
SNRPA1-210ENST00000560383 SELENOWP63302 87 aa13.3□□□□□ -0.28
SNRPA1-210ENST00000560383 LIPEQ05469 1076 aa13.3□□□□□ -0.28
SNRPA1-210ENST00000560383 ZNF74Q16587 644 aa13.3□□□□□ -0.28
SNRPA1-210ENST00000560383 NIPAL3Q6P499 406 aa13.3□□□□□ -0.28
SNRPA1-210ENST00000560383 LINGO2Q7L985 606 aa13.3□□□□□ -0.28
SNRPA1-210ENST00000560383 PIGWQ7Z7B1 504 aa13.3□□□□□ -0.28
SNRPA1-210ENST00000560383 FAM107BQ9H098 131 aa13.3□□□□□ -0.28
SNRPA1-210ENST00000560383 SLC17A5Q9NRA2 495 aa13.3□□□□□ -0.28
SNRPA1-210ENST00000560383 GMPR2Q9P2T1 348 aaKnown RBP13.3□□□□□ -0.28
SNRPA1-210ENST00000560383 SLC7A7Q9UM01 511 aa13.3□□□□□ -0.28
SNRPA1-210ENST00000560383 AMDHD2Q9Y303 409 aa13.3□□□□□ -0.28
SNRPA1-210ENST00000560383 USF3Q68DE3 2245 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 HIVEP2P31629 2446 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 ZNF587BE7ETH6 402 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 LRRN3E7EW58 273 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 OVOL3O00110 214 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 PLPP3O14495 311 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 DYNC1I1O14576 645 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 UPK3AO75631 287 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 IGF2P01344 180 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 THRBP10828 461 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 NQO1P15559 274 aaKnown RBP13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 TNFRSF1BP20333 461 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 CBLP22681 906 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 PTAFRP25105 342 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 RBM34P42696 430 aaKnown RBP13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 NUDT2P50583 147 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 ATP5J2P56134 94 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 GNGT1P63211 74 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 LGALS3BPQ08380 585 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 PUDPQ08623 228 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 C1DQ13901 141 aaKnown RBP13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 LRRC23Q53EV4 343 aaPredicted RBP13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 C9orf135Q5VTT2 229 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 TTC33Q6PID6 262 aaPredicted RBP13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 PXKQ7Z7A4 578 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 UEVLDQ8IX04 471 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 TMEM123Q8N131 208 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 OR52N5Q8NH56 324 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 MAGEE2Q8TD90 523 aaPredicted RBP13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 RADILQ96JH8 1075 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 OR2M2Q96R28 347 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 ALG2Q9H553 416 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 FKRPQ9H9S5 495 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 OBP2BQ9NPH6 170 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 NOX1Q9Y5S8 564 aa13.29□□□□□ -0.28
SNRPA1-210ENST00000560383 CADP27708 2225 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 SHISA9B4DS77 424 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 CLOCKO15516 846 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 AKAP8O43823 692 aaKnown RBP13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 SLC43A1O75387 559 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 KRT33AO76009 404 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 ASAH2BP0C7U1 165 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms