RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 RLIMQ9NVW2 624 aa14.2□□□□□ -0.14
HERC1-207ENST00000560316 B3GNT2Q9NY97 397 aa14.2□□□□□ -0.14
HERC1-207ENST00000560316 DUSP13Q9UII6 198 aa14.2□□□□□ -0.14
HERC1-207ENST00000560316 J3QLI3 93 aa14.19□□□□□ -0.14
HERC1-207ENST00000560316 IL7RP16871 459 aa14.19□□□□□ -0.14
HERC1-207ENST00000560316 ZNF43P17038 809 aa14.19□□□□□ -0.14
HERC1-207ENST00000560316 FPR2P25090 351 aa14.19□□□□□ -0.14
HERC1-207ENST00000560316 TRMT5Q32P41 509 aaKnown RBP14.19□□□□□ -0.14
HERC1-207ENST00000560316 PHYHD1Q5SRE7 291 aa14.19□□□□□ -0.14
HERC1-207ENST00000560316 CCDC36Q8IYA8 594 aa14.19□□□□□ -0.14
HERC1-207ENST00000560316 TAF15Q92804 592 aaKnown RBP eCLIP14.19□□□□□ -0.14
HERC1-207ENST00000560316 DVL3Q92997 716 aaPredicted RBP14.19□□□□□ -0.14
HERC1-207ENST00000560316 SLC25A36Q96CQ1 311 aa14.19□□□□□ -0.14
HERC1-207ENST00000560316 TUBGCP3Q96CW5 907 aa14.19□□□□□ -0.14
HERC1-207ENST00000560316 NEURL3Q96EH8 262 aa14.19□□□□□ -0.14
HERC1-207ENST00000560316 ZNF75AQ96N20 296 aa14.19□□□□□ -0.14
HERC1-207ENST00000560316 TRNT1Q96Q11 434 aaKnown RBP14.19□□□□□ -0.14
HERC1-207ENST00000560316 C7orf69Q9H7B7 122 aa14.19□□□□□ -0.14
HERC1-207ENST00000560316 GRPEL1Q9HAV7 217 aa14.19□□□□□ -0.14
HERC1-207ENST00000560316 SEC14L4Q9UDX3 406 aa14.19□□□□□ -0.14
HERC1-207ENST00000560316 MARCOQ9UEW3 520 aaPredicted RBP14.19□□□□□ -0.14
HERC1-207ENST00000560316 OPN4Q9UHM6 478 aa14.19□□□□□ -0.14
HERC1-207ENST00000560316 ZDHHC2Q9UIJ5 367 aa14.19□□□□□ -0.14
HERC1-207ENST00000560316 RCE1Q9Y256 329 aa14.19□□□□□ -0.14
HERC1-207ENST00000560316 NOTCH1P46531 2555 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 A0A1W2PPW3 197 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 ZNF99A8MXY4 864 aaPredicted RBP14.18□□□□□ -0.14
HERC1-207ENST00000560316 NPHS1O60500 1241 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 NPIPB7O75200 414 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 FSHBP01225 129 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 NUDT17P0C025 328 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 TFPTP0C1Z6 253 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 PNMTP11086 282 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 ZNF14P17017 642 aaPredicted RBP14.18□□□□□ -0.14
HERC1-207ENST00000560316 RPS4Y1P22090 263 aaKnown RBP14.18□□□□□ -0.14
HERC1-207ENST00000560316 ALDH3A1P30838 453 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 CHI3L1P36222 383 aaPredicted RBP14.18□□□□□ -0.14
HERC1-207ENST00000560316 ACAA2P42765 397 aaKnown RBP14.18□□□□□ -0.14
HERC1-207ENST00000560316 FXNQ16595 210 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 GSG1Q2KHT4 349 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 GLIPR1L2Q4G1C9 344 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 WBP2NLQ6ICG8 309 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 ZNF771Q7L3S4 317 aaPredicted RBP14.18□□□□□ -0.14
HERC1-207ENST00000560316 HOMEZQ8IX15 550 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 C4orf33Q8N1A6 199 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 LRRC58Q96CX6 371 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 RAB39BQ96DA2 213 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 SLC35A5Q9BS91 424 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 MECRQ9BV79 373 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 DPY30Q9C005 99 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 ZNF385DQ9H6B1 395 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 B3GAT1Q9P2W7 334 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 MID2Q9UJV3 735 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 ARHGAP32A7KAX9 2087 aa14.18□□□□□ -0.14
HERC1-207ENST00000560316 DNAJC9-AS1A6NH13 148 aa14.17□□□□□ -0.14
HERC1-207ENST00000560316 FTCDNL1E5RQL4 147 aa14.17□□□□□ -0.14
HERC1-207ENST00000560316 M0R3G1 203 aa14.17□□□□□ -0.14
HERC1-207ENST00000560316 IGHV2-5P01817 119 aa14.17□□□□□ -0.14
HERC1-207ENST00000560316 FAM153BP0C7A2 387 aa14.17□□□□□ -0.14
HERC1-207ENST00000560316 KRT4P19013 534 aa14.17□□□□□ -0.14
HERC1-207ENST00000560316 PRTN3P24158 256 aa14.17□□□□□ -0.14
HERC1-207ENST00000560316 ARRB2P32121 409 aa14.17□□□□□ -0.14
HERC1-207ENST00000560316 PTDSS1P48651 473 aaKnown RBP14.17□□□□□ -0.14
HERC1-207ENST00000560316 CCL8P80075 99 aa14.17□□□□□ -0.14
HERC1-207ENST00000560316 GALK2Q01415 458 aa14.17□□□□□ -0.14
HERC1-207ENST00000560316 GNA13Q14344 377 aa14.17□□□□□ -0.14
HERC1-207ENST00000560316 CHI3L2Q15782 390 aa14.17□□□□□ -0.14
HERC1-207ENST00000560316 RBMS3Q6XE24 437 aaKnown RBP14.17□□□□□ -0.14
HERC1-207ENST00000560316 LRRC74BQ6ZQY2 392 aa14.17□□□□□ -0.14
HERC1-207ENST00000560316 RNF130Q86XS8 419 aa14.17□□□□□ -0.14
HERC1-207ENST00000560316 ZNF440Q8IYI8 595 aa14.17□□□□□ -0.14
HERC1-207ENST00000560316 CNPY4Q8N129 248 aa14.17□□□□□ -0.14
HERC1-207ENST00000560316 OR8J2Q8NGG1 315 aa14.17□□□□□ -0.14
HERC1-207ENST00000560316 OR2M2Q96R28 347 aa14.17□□□□□ -0.14
HERC1-207ENST00000560316 MTHFD2LQ9H903 347 aaPredicted RBP14.17□□□□□ -0.14
HERC1-207ENST00000560316 PRSS51A0A1B0GVH4 220 aa14.16□□□□□ -0.14
HERC1-207ENST00000560316 SMIM23A6NLE4 172 aa14.16□□□□□ -0.14
HERC1-207ENST00000560316 AHSA1O95433 338 aa14.16□□□□□ -0.14
HERC1-207ENST00000560316 DBIP07108 87 aaKnown RBP14.16□□□□□ -0.14
HERC1-207ENST00000560316 PRG2P13727 222 aa14.16□□□□□ -0.14
HERC1-207ENST00000560316 RPS5P46782 204 aaKnown RBP14.16□□□□□ -0.14
HERC1-207ENST00000560316 AQP5P55064 265 aa14.16□□□□□ -0.14
HERC1-207ENST00000560316 COPZ1P61923 177 aa14.16□□□□□ -0.14
HERC1-207ENST00000560316 RPS23P62266 143 aaKnown RBP14.16□□□□□ -0.14
HERC1-207ENST00000560316 EMX2Q04743 252 aa14.16□□□□□ -0.14
HERC1-207ENST00000560316 C1DQ13901 141 aaKnown RBP14.16□□□□□ -0.14
HERC1-207ENST00000560316 NKPD1Q17RQ9 610 aa14.16□□□□□ -0.14
HERC1-207ENST00000560316 CARD17Q5XLA6 110 aa14.16□□□□□ -0.14
HERC1-207ENST00000560316 ATG16L1Q676U5 607 aa14.16□□□□□ -0.14
HERC1-207ENST00000560316 ZNF836Q6ZNA1 936 aa14.16□□□□□ -0.14
HERC1-207ENST00000560316 VRK2Q86Y07 508 aa14.16□□□□□ -0.14
HERC1-207ENST00000560316 PIK3C3Q8NEB9 887 aa14.16□□□□□ -0.14
HERC1-207ENST00000560316 MFSD8Q8NHS3 518 aa14.16□□□□□ -0.14
HERC1-207ENST00000560316 C1orf147Q96MC9 270 aaPredicted RBP14.16□□□□□ -0.14
HERC1-207ENST00000560316 OXGR1Q96P68 337 aa14.16□□□□□ -0.14
HERC1-207ENST00000560316 PTDSS2Q9BVG9 487 aa14.16□□□□□ -0.14
HERC1-207ENST00000560316 NOP53Q9NZM5 478 aaKnown RBP14.16□□□□□ -0.14
HERC1-207ENST00000560316 TAAR3PQ9P1P4 343 aa14.16□□□□□ -0.14
HERC1-207ENST00000560316 ZNF346Q9UL40 294 aaKnown RBP14.16□□□□□ -0.14
HERC1-207ENST00000560316 CDHR4A6H8M9 788 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms