RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 NDEL1Q9GZM8 345 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 RPRD1BQ9NQG5 326 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 CTSFQ9UBX1 484 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 A0A0G2JK05 382 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 TXNDC12O95881 172 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 IMPDH2P12268 514 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 ABCD3P28288 659 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 TMED10P49755 219 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 PNLIPRP2P54317 469 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 RPL18Q07020 188 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 CCDC58Q4VC31 144 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 LANCL3Q6ZV70 420 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 LRRC28Q86X40 367 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 ZNF441Q8N8Z8 693 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 PLPP5Q8NEB5 264 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 THAP4Q8WY91 577 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 ALG12Q9BV10 488 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 TBL1XR1Q9BZK7 514 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 B3GAT2Q9NPZ5 323 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 INIPQ9NRY2 104 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 ACOXLQ9NUZ1 547 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 EXTL2Q9UBQ6 330 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 PAIP2BQ9ULR5 123 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 SRPK3Q9UPE1 567 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 RASD1Q9Y272 281 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 TRAV1-2A0A0B4J238 106 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 C4orf47A7E2U8 309 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 TOX3O15405 576 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 GMFGO60234 142 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 CDC40O60508 579 aaKnown RBP eCLIP13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 CPNE3O75131 537 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 F13BP05160 661 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 CD59P13987 128 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 ITPKBP27987 946 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 CSRP2Q16527 193 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 EMC4Q5J8M3 183 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 GUSBP11Q6P575 273 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 TMEM71Q6P5X7 295 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 LYPD4Q6UWN0 246 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 COX15Q7KZN9 410 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 RDH10Q8IZV5 341 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 EXD3Q8N9H8 876 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 TAAR8Q969N4 342 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 MMP28Q9H239 520 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 FKRPQ9H9S5 495 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 MOKQ9UQ07 419 aa13.14□□□□□ -0.31
RABGGTA-212ENST00000559974 TRBV2A0A0J9YWF9 115 aa13.13□□□□□ -0.31
RABGGTA-212ENST00000559974 TFECO14948 347 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-212ENST00000559974 HIST1H2ABP04908 130 aa13.13□□□□□ -0.31
RABGGTA-212ENST00000559974 PGCP20142 388 aa13.13□□□□□ -0.31
RABGGTA-212ENST00000559974 RAB3BP20337 219 aa13.13□□□□□ -0.31
RABGGTA-212ENST00000559974 CXCR1P25024 350 aa13.13□□□□□ -0.31
RABGGTA-212ENST00000559974 EDNRAP25101 427 aa13.13□□□□□ -0.31
RABGGTA-212ENST00000559974 RPS5P46782 204 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-212ENST00000559974 TOMM34Q15785 309 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-212ENST00000559974 RHBDD2Q6NTF9 364 aa13.13□□□□□ -0.31
RABGGTA-212ENST00000559974 IL20RBQ6UXL0 311 aa13.13□□□□□ -0.31
RABGGTA-212ENST00000559974 HIST3H2AQ7L7L0 130 aa13.13□□□□□ -0.31
RABGGTA-212ENST00000559974 ENKURQ8TC29 256 aa13.13□□□□□ -0.31
RABGGTA-212ENST00000559974 HIST1H2ACQ93077 130 aa13.13□□□□□ -0.31
RABGGTA-212ENST00000559974 TP53INP1Q96A56 240 aa13.13□□□□□ -0.31
RABGGTA-212ENST00000559974 SLC7A5P2Q9GIP4 190 aa13.13□□□□□ -0.31
RABGGTA-212ENST00000559974 TGIF2Q9GZN2 237 aa13.13□□□□□ -0.31
RABGGTA-212ENST00000559974 CCDC86Q9H6F5 360 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-212ENST00000559974 CYSLTR2Q9NS75 346 aa13.13□□□□□ -0.31
RABGGTA-212ENST00000559974 GRHPRQ9UBQ7 328 aa13.13□□□□□ -0.31
RABGGTA-212ENST00000559974 NPFFR2Q9Y5X5 522 aa13.13□□□□□ -0.31
RABGGTA-212ENST00000559974 CEP250Q9BV73 2442 aa13.13□□□□□ -0.31
RABGGTA-212ENST00000559974 C17orf51A8MQB3 221 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 FAM171A2A8MVW0 826 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 PROB1E7EW31 1015 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 GATBO75879 557 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 CCNKO75909 580 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 ARL6IP5O75915 188 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 NUDT14O95848 222 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 TALDO1P37837 337 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 RPS11P62280 158 aaKnown RBP eCLIP13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 SHISA6Q6ZSJ9 500 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 SLC16A9Q7RTY1 509 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 TMPRSS9Q7Z410 1059 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 SAMD12Q8N8I0 201 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 RNF31Q96EP0 1072 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 TSSK2Q96PF2 358 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 TSPAN32Q96QS1 320 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 SLC22A11Q9NSA0 550 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 ATXN7L1Q9ULK2 861 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 CPAMD8Q8IZJ3 1885 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 TRAV36DV7A0A075B6V5 113 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 MEIOCA2RUB1 952 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 B4DXG7 233 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 GPRIN2O60269 458 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 BGLAPP02818 100 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 EIF4EP06730 217 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 PRKAR1AP10644 381 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 GP1BBP13224 206 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 PNLIPP16233 465 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 NPR2P20594 1047 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 RBMS1P29558 406 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 EVI2BP34910 448 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 PSMB10P40306 273 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms