RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 ADAM18Q9Y3Q7 739 aa16.12■□□□□ 0.17
SNX1-208ENST00000559844 PCSK5Q92824 1860 aa16.12■□□□□ 0.17
SNX1-208ENST00000559844 ISPDA4D126 451 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 BLOC1S5-TXNDC5H3BN57 136 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 SCO2O43819 266 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 UPK1BO75841 260 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 GYPBP06028 91 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 PRKAR1AP10644 381 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 NAGAP17050 411 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 UQCRC1P31930 480 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 AQP2P41181 271 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 POLR2HP52434 150 aaKnown RBP16.11■□□□□ 0.17
SNX1-208ENST00000559844 ERVK-25P63136 954 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 TRAM1Q15629 374 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 TRIM16LQ309B1 348 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 NANOGNBQ7Z5D8 188 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 CCDC190Q86UF4 302 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 PARP16Q8N5Y8 322 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 ARIH2OSQ8N7S6 290 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 LRRC75AQ8NAA5 344 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 ZCCHC14Q8WYQ9 949 aaKnown RBP16.11■□□□□ 0.17
SNX1-208ENST00000559844 TMCO6Q96DC7 493 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 MRPL48Q96GC5 212 aaKnown RBP16.11■□□□□ 0.17
SNX1-208ENST00000559844 MOGAT1Q96PD6 335 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 CNN2Q99439 309 aaKnown RBP16.11■□□□□ 0.17
SNX1-208ENST00000559844 TMED9Q9BVK6 235 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 RERGLQ9H628 205 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 KLHL1Q9NR64 748 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 P4HTMQ9NXG6 502 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 ZFHX4Q86UP3 3567 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 TRAV36DV7A0A075B6V5 113 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 IGHV1-45A0A0A0MS14 117 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 TRBV11-1A0A0K0K1C0 115 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 NKX2-8O15522 239 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 RNF13O43567 381 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 SLC25A12O75746 678 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 OR2T7P0C7T2 308 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 COX6A1P12074 109 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 DIO1P49895 249 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 ZNF85Q03923 595 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.11■□□□□ 0.171e-6■□□□□ 10.6
SNX1-208ENST00000559844 EMC4Q5J8M3 183 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 JAZF1Q86VZ6 243 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 OR2T27Q8NH04 317 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 AP3S1Q92572 193 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 ABTB1Q969K4 478 aaPredicted RBP16.11■□□□□ 0.17
SNX1-208ENST00000559844 KTI12Q96EK9 354 aaPredicted RBP16.11■□□□□ 0.17
SNX1-208ENST00000559844 DDOQ99489 341 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 TIMP4Q99727 224 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 WDR77Q9BQA1 342 aaPredicted RBP16.11■□□□□ 0.17
SNX1-208ENST00000559844 NMNAT2Q9BZQ4 307 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 KCNN2Q9H2S1 579 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 UGT2A1Q9Y4X1 527 aa16.11■□□□□ 0.17
SNX1-208ENST00000559844 GABRPO00591 440 aa16.1■□□□□ 0.17
SNX1-208ENST00000559844 TXNDC12O95881 172 aa16.1■□□□□ 0.17
SNX1-208ENST00000559844 MT-ATP6P00846 226 aa16.1■□□□□ 0.17
SNX1-208ENST00000559844 SDHAP31040 664 aa16.1■□□□□ 0.17
SNX1-208ENST00000559844 SDC2P34741 201 aa16.1■□□□□ 0.17
SNX1-208ENST00000559844 CTXN1P60606 82 aa16.1■□□□□ 0.17
SNX1-208ENST00000559844 IFITM3Q01628 133 aa16.1■□□□□ 0.17
SNX1-208ENST00000559844 MXD1Q05195 221 aa16.1■□□□□ 0.17
SNX1-208ENST00000559844 LTBQ06643 244 aa16.1■□□□□ 0.17
SNX1-208ENST00000559844 OXA1LQ15070 435 aa16.1■□□□□ 0.17
SNX1-208ENST00000559844 PCOLCEQ15113 449 aa16.1■□□□□ 0.17
SNX1-208ENST00000559844 QPRTQ15274 297 aa16.1■□□□□ 0.17
SNX1-208ENST00000559844 GXYLT1Q4G148 440 aa16.1■□□□□ 0.17
SNX1-208ENST00000559844 ZNF524Q96C55 264 aa16.1■□□□□ 0.17
SNX1-208ENST00000559844 WDFY2Q96P53 400 aa16.1■□□□□ 0.17
SNX1-208ENST00000559844 NMNAT3Q96T66 252 aa16.1■□□□□ 0.17
SNX1-208ENST00000559844 SLC30A2Q9BRI3 323 aa16.1■□□□□ 0.17
SNX1-208ENST00000559844 TEX13CA0A0J9YWL9 993 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 A0A1W2PQL4 384 aaPredicted RBP16.09■□□□□ 0.17
SNX1-208ENST00000559844 ZNF891A8MT65 544 aaPredicted RBP16.09■□□□□ 0.17
SNX1-208ENST00000559844 CTDSP2O14595 271 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 MAGEB3O15480 346 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 EFSO43281 561 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 RGS9O75916 674 aaPredicted RBP16.09■□□□□ 0.17
SNX1-208ENST00000559844 HTR3AP46098 478 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 SLC25A1P53007 311 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 SUMO3P55854 103 aaPredicted RBP16.09■□□□□ 0.17
SNX1-208ENST00000559844 ACTA2P62736 377 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 ACTG2P63267 376 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 HNRNPA0Q13151 305 aaKnown RBP16.09■□□□□ 0.17
SNX1-208ENST00000559844 TOMM34Q15785 309 aaPredicted RBP16.09■□□□□ 0.17
SNX1-208ENST00000559844 C5orf46Q6UWT4 87 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 LRRC69Q6ZNQ3 347 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 NDUFAF7Q7L592 441 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 GRINAQ7Z429 371 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 GPR119Q8TDV5 335 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 TMEM234Q8WY98 164 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 TAAR8Q969N4 342 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 PPP1R14BQ96C90 147 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 RASD2Q96D21 266 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 ZMYND19Q96E35 227 aaPredicted RBP16.09■□□□□ 0.17
SNX1-208ENST00000559844 ZNF700Q9H0M5 742 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 TPK1Q9H3S4 243 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 TAS2R10Q9NYW0 307 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 ANKRD11Q6UB99 2663 aaPredicted RBP16.09■□□□□ 0.17
SNX1-208ENST00000559844 HEATR5AQ86XA9 2040 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 TMED7-TICAM2A0A0A6YYA0 188 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms