RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 FAM131AQ6UXB0 335 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 CASP12Q6UXS9 341 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 TMEM64Q6YI46 380 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 TSEN54Q7Z6J9 526 aaKnown RBP5.31□□□□□ -1.56
USP3-212ENST00000559276 CDC20BQ86Y33 519 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 KRTAP1-3Q8IUG1 177 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 PHC2Q8IXK0 858 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 TAGAPQ8N103 731 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 NANOGP1Q8N7R0 232 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 SPERTQ8NA61 448 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 C19orf18Q8NEA5 215 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 OR5L2Q8NGL0 311 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 NEIL3Q8TAT5 605 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 DNAJA4Q8WW22 397 aaPredicted RBP5.31□□□□□ -1.56
USP3-212ENST00000559276 ACOT12Q8WYK0 555 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 NINJ1Q92982 152 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 UBE2FQ969M7 185 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 CREB3L1Q96BA8 519 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 SARAFQ96BY9 339 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 MARVELD1Q9BSK0 173 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 POLDIP3Q9BY77 421 aaKnown RBP5.31□□□□□ -1.56
USP3-212ENST00000559276 WWTR1Q9GZV5 400 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 UBQLN3Q9H347 655 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 REEP4Q9H6H4 257 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 ZFP64Q9NPA5 681 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 ACKR4Q9NPB9 350 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 A4GALTQ9NPC4 353 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 MYNNQ9NPC7 610 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 ZNF275Q9NSD4 429 aaPredicted RBP5.31□□□□□ -1.56
USP3-212ENST00000559276 ACER3Q9NUN7 267 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 ERVK13-1Q9NX77 482 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 TAS2R7Q9NYW3 318 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 ACAD8Q9UKU7 415 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 TMCC3Q9ULS5 477 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 CBLCQ9ULV8 474 aa5.31□□□□□ -1.56
USP3-212ENST00000559276 FLNAP21333 2647 aaKnown RBP5.31□□□□□ -1.56
USP3-212ENST00000559276 A0A0A6YYD5 115 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 SYNDIG1LA6NDD5 238 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 FABP12A6NFH5 140 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 TUBAL3A6NHL2 446 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 GLOD5A6NK44 160 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 A6NNC1 897 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 PGRMC2O15173 223 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 PDPK1O15530 556 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 NOS1APO75052 506 aaPredicted RBP5.3□□□□□ -1.56
USP3-212ENST00000559276 ZNF780AO75290 641 aaPredicted RBP5.3□□□□□ -1.56
USP3-212ENST00000559276 DIRAS1O95057 198 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 CPSF4O95639 269 aaKnown RBP5.3□□□□□ -1.56
USP3-212ENST00000559276 EPPINO95925 133 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 ANXA4P09525 319 aaPredicted RBP5.3□□□□□ -1.56
USP3-212ENST00000559276 TSPAN19P0C672 248 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 LAMP1P11279 417 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 MYL12AP19105 171 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 GSTM3P21266 225 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 S1PR1P21453 382 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 SSTR4P31391 388 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 SSR2P43308 183 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 CAPZA2P47755 286 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 OR3A3P47888 321 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 ZNF136P52737 540 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 NUDT6P53370 316 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 MVDP53602 400 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 RAG2P55895 527 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 WNT4P56705 351 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 CLDN20P56880 219 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 RPS13P62277 151 aaKnown RBP5.3□□□□□ -1.56
USP3-212ENST00000559276 ADAM8P78325 824 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 TGM3Q08188 693 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 ACSM1Q08AH1 577 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 RAB40BQ12829 278 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 DUSP8Q13202 625 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 GAB1Q13480 694 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 HEPACAMQ14CZ8 416 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 DAZAP2Q15038 168 aaPredicted RBP5.3□□□□□ -1.56
USP3-212ENST00000559276 CEBPEQ15744 281 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 CARTPTQ16568 116 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 NTRK2Q16620 822 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 SWI5Q1ZZU3 235 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 ACSF3Q4G176 576 aaPredicted RBP5.3□□□□□ -1.56
USP3-212ENST00000559276 CCDC58Q4VC31 144 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 FAM209AQ5JX71 171 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 TRIQKQ629K1 86 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 SAXO2Q658L1 398 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 OR4C11Q6IEV9 310 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 REEP3Q6NUK4 255 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 MED27Q6P2C8 311 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 KLHL17Q6TDP4 642 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 WDR53Q7Z5U6 358 aaPredicted RBP5.3□□□□□ -1.56
USP3-212ENST00000559276 LAX1Q8IWV1 398 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 MMP21Q8N119 569 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 ZNF615Q8N8J6 731 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 AQP11Q8NBQ7 271 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 SRFBP1Q8NEF9 429 aaKnown RBP5.3□□□□□ -1.56
USP3-212ENST00000559276 HUS1BQ8NHY5 278 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 TMEM163Q8TC26 289 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 GPR151Q8TDV0 419 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 UBE2E3Q969T4 207 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 ADIPOR1Q96A54 375 aa5.3□□□□□ -1.56
USP3-212ENST00000559276 KCTD12Q96CX2 325 aaKnown RBP5.3□□□□□ -1.56
USP3-212ENST00000559276 RADILQ96JH8 1075 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms