RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 TMEM27Q9HBJ8 222 aa14.85□□□□□ -0.03
LRRC28-210ENST00000558879 BARX1Q9HBU1 254 aaPredicted RBP14.85□□□□□ -0.03
LRRC28-210ENST00000558879 CORINQ9Y5Q5 1042 aa14.85□□□□□ -0.03
LRRC28-210ENST00000558879 IGHV1-18A0A0C4DH31 117 aa14.84□□□□□ -0.03
LRRC28-210ENST00000558879 ATP6V1G2-DDX39BF2Z307 99 aa14.84□□□□□ -0.03
LRRC28-210ENST00000558879 H7C417 338 aa14.84□□□□□ -0.03
LRRC28-210ENST00000558879 CHP2O43745 196 aa14.84□□□□□ -0.03
LRRC28-210ENST00000558879 KRT33AO76009 404 aa14.84□□□□□ -0.03
LRRC28-210ENST00000558879 CDH2P19022 906 aaPredicted RBP14.84□□□□□ -0.03
LRRC28-210ENST00000558879 CD247P20963 164 aa14.84□□□□□ -0.03
LRRC28-210ENST00000558879 PAX7P23759 505 aa14.84□□□□□ -0.03
LRRC28-210ENST00000558879 CDH12P55289 794 aa14.84□□□□□ -0.03
LRRC28-210ENST00000558879 ROR2Q01974 943 aaKnown RBP14.84□□□□□ -0.03
LRRC28-210ENST00000558879 C3orf36Q3SXR2 165 aa14.84□□□□□ -0.03
LRRC28-210ENST00000558879 ZNF613Q6PF04 617 aa14.84□□□□□ -0.03
LRRC28-210ENST00000558879 NHLRC1Q6VVB1 395 aa14.84□□□□□ -0.03
LRRC28-210ENST00000558879 H1FNTQ75WM6 255 aaPredicted RBP14.84□□□□□ -0.03
LRRC28-210ENST00000558879 FBXL14Q8N1E6 418 aa14.84□□□□□ -0.03
LRRC28-210ENST00000558879 DEPDC4Q8N2C3 294 aa14.84□□□□□ -0.03
LRRC28-210ENST00000558879 OR4D11Q8NGI4 311 aa14.84□□□□□ -0.03
LRRC28-210ENST00000558879 OR6T1Q8NGN1 323 aa14.84□□□□□ -0.03
LRRC28-210ENST00000558879 MOGAT1Q96PD6 335 aa14.84□□□□□ -0.03
LRRC28-210ENST00000558879 OR2M2Q96R28 347 aa14.84□□□□□ -0.03
LRRC28-210ENST00000558879 EPYCQ99645 322 aa14.84□□□□□ -0.03
LRRC28-210ENST00000558879 MCHR1Q99705 422 aa14.84□□□□□ -0.03
LRRC28-210ENST00000558879 FKRPQ9H9S5 495 aa14.84□□□□□ -0.03
LRRC28-210ENST00000558879 SLC13A4Q9UKG4 626 aa14.84□□□□□ -0.03
LRRC28-210ENST00000558879 SONP18583 2426 aaKnown RBP14.84□□□□□ -0.03
LRRC28-210ENST00000558879 ABCA2Q9BZC7 2435 aa14.83□□□□□ -0.04
LRRC28-210ENST00000558879 MS4A18H0YCH9 400 aa14.83□□□□□ -0.04
LRRC28-210ENST00000558879 M0QX08 132 aa14.83□□□□□ -0.04
LRRC28-210ENST00000558879 AKAP8O43823 692 aaKnown RBP14.83□□□□□ -0.04
LRRC28-210ENST00000558879 SLC43A1O75387 559 aa14.83□□□□□ -0.04
LRRC28-210ENST00000558879 LYPD3O95274 346 aa14.83□□□□□ -0.04
LRRC28-210ENST00000558879 HPRP00739 348 aa14.83□□□□□ -0.04
LRRC28-210ENST00000558879 IGKV3-15P01624 115 aa14.83□□□□□ -0.04
LRRC28-210ENST00000558879 IGLV1-44P01699 117 aa14.83□□□□□ -0.04
LRRC28-210ENST00000558879 HOXB1P14653 301 aaPredicted RBP14.83□□□□□ -0.04
LRRC28-210ENST00000558879 MS4A18Q3C1V0 323 aa14.83□□□□□ -0.04
LRRC28-210ENST00000558879 COQ5Q5HYK3 327 aa14.83□□□□□ -0.04
LRRC28-210ENST00000558879 ANKRD16Q6P6B7 361 aa14.83□□□□□ -0.04
LRRC28-210ENST00000558879 WDR88Q6ZMY6 472 aa14.83□□□□□ -0.04
LRRC28-210ENST00000558879 PATL1Q86TB9 770 aaKnown RBP14.83□□□□□ -0.04
LRRC28-210ENST00000558879 TSPYL5Q86VY4 417 aaPredicted RBP14.83□□□□□ -0.04
LRRC28-210ENST00000558879 OR10A6Q8NH74 314 aa14.83□□□□□ -0.04
LRRC28-210ENST00000558879 TAMM41Q96BW9 452 aa14.83□□□□□ -0.04
LRRC28-210ENST00000558879 HS6ST2Q96MM7 605 aa14.83□□□□□ -0.04
LRRC28-210ENST00000558879 SLC38A2Q96QD8 506 aa14.83□□□□□ -0.04
LRRC28-210ENST00000558879 KATNB1Q9BVA0 655 aa14.83□□□□□ -0.04
LRRC28-210ENST00000558879 PCDHAC1Q9H158 963 aa14.83□□□□□ -0.04
LRRC28-210ENST00000558879 GPR35Q9HC97 309 aa14.83□□□□□ -0.04
LRRC28-210ENST00000558879 MRGBPQ9NV56 204 aa14.83□□□□□ -0.04
LRRC28-210ENST00000558879 ZNF446Q9NWS9 450 aa14.83□□□□□ -0.04
LRRC28-210ENST00000558879 MRPL39Q9NYK5 338 aaKnown RBP14.83□□□□□ -0.04
LRRC28-210ENST00000558879 SELENONQ9NZV5 590 aa14.83□□□□□ -0.04
LRRC28-210ENST00000558879 A0A096LNT2 108 aa14.82□□□□□ -0.04
LRRC28-210ENST00000558879 RNF223E7ERA6 249 aa14.82□□□□□ -0.04
LRRC28-210ENST00000558879 THY1P04216 161 aa14.82□□□□□ -0.04
LRRC28-210ENST00000558879 HLA-DOBP13765 273 aa14.82□□□□□ -0.04
LRRC28-210ENST00000558879 CBLP22681 906 aa14.82□□□□□ -0.04
LRRC28-210ENST00000558879 FABP6P51161 128 aa14.82□□□□□ -0.04
LRRC28-210ENST00000558879 VMACQ2NL98 169 aa14.82□□□□□ -0.04
LRRC28-210ENST00000558879 ENTPD8Q5MY95 495 aa14.82□□□□□ -0.04
LRRC28-210ENST00000558879 INTS11Q5TA45 600 aaKnown RBP14.82□□□□□ -0.04
LRRC28-210ENST00000558879 NANOGP8Q6NSW7 305 aa14.82□□□□□ -0.04
LRRC28-210ENST00000558879 HMBOX1Q6NT76 420 aa14.82□□□□□ -0.04
LRRC28-210ENST00000558879 CCDC80Q76M96 950 aa14.82□□□□□ -0.04
LRRC28-210ENST00000558879 CALHM3Q86XJ0 350 aa14.82□□□□□ -0.04
LRRC28-210ENST00000558879 FAM169BQ8N8A8 192 aa14.82□□□□□ -0.04
LRRC28-210ENST00000558879 PIK3C3Q8NEB9 887 aa14.82□□□□□ -0.04
LRRC28-210ENST00000558879 ZNF837Q96EG3 531 aaPredicted RBP14.82□□□□□ -0.04
LRRC28-210ENST00000558879 ADAD1Q96M93 576 aaKnown RBP14.82□□□□□ -0.04
LRRC28-210ENST00000558879 ZNF426Q9BUY5 554 aa14.82□□□□□ -0.04
LRRC28-210ENST00000558879 ASPNQ9BXN1 380 aa14.82□□□□□ -0.04
LRRC28-210ENST00000558879 REG4Q9BYZ8 158 aa14.82□□□□□ -0.04
LRRC28-210ENST00000558879 NANOGQ9H9S0 305 aa14.82□□□□□ -0.04
LRRC28-210ENST00000558879 MOV10Q9HCE1 1003 aaKnown RBP14.82□□□□□ -0.04
LRRC28-210ENST00000558879 FGFR1OP2Q9NVK5 253 aa14.82□□□□□ -0.04
LRRC28-210ENST00000558879 MOKQ9UQ07 419 aa14.82□□□□□ -0.04
LRRC28-210ENST00000558879 ATP23Q9Y6H3 246 aa14.82□□□□□ -0.04
LRRC28-210ENST00000558879 ZNF503-AS2A6NEH8 195 aa14.81□□□□□ -0.04
LRRC28-210ENST00000558879 CPSF4LA6NMK7 179 aaKnown RBP14.81□□□□□ -0.04
LRRC28-210ENST00000558879 BBIP1A8MTZ0 92 aa14.81□□□□□ -0.04
LRRC28-210ENST00000558879 LRRN3E7EW58 273 aa14.81□□□□□ -0.04
LRRC28-210ENST00000558879 MT-ATP6P00846 226 aa14.81□□□□□ -0.04
LRRC28-210ENST00000558879 CECR9P0C854 216 aa14.81□□□□□ -0.04
LRRC28-210ENST00000558879 TROVE2P10155 538 aaKnown RBP eCLIP14.81□□□□□ -0.04
LRRC28-210ENST00000558879 NQO1P15559 274 aaKnown RBP14.81□□□□□ -0.04
LRRC28-210ENST00000558879 APOBEC3AP31941 199 aaPredicted RBP14.81□□□□□ -0.04
LRRC28-210ENST00000558879 UBE2NP61088 152 aaKnown RBP14.81□□□□□ -0.04
LRRC28-210ENST00000558879 TUBA1BP68363 451 aa14.81□□□□□ -0.04
LRRC28-210ENST00000558879 TUBA4AP68366 448 aa14.81□□□□□ -0.04
LRRC28-210ENST00000558879 POU3F1Q03052 451 aaPredicted RBP14.81□□□□□ -0.04
LRRC28-210ENST00000558879 PUDPQ08623 228 aa14.81□□□□□ -0.04
LRRC28-210ENST00000558879 C1DQ13901 141 aaKnown RBP14.81□□□□□ -0.04
LRRC28-210ENST00000558879 CEACAM16Q2WEN9 425 aa14.81□□□□□ -0.04
LRRC28-210ENST00000558879 RABL3Q5HYI8 236 aa14.81□□□□□ -0.04
LRRC28-210ENST00000558879 PHYHD1Q5SRE7 291 aa14.81□□□□□ -0.04
LRRC28-210ENST00000558879 REP15Q6BDI9 236 aa14.81□□□□□ -0.04
LRRC28-210ENST00000558879 TUBA1AQ71U36 451 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms