RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 VAMP5O95183 116 aa11.75□□□□□ -0.53
VPS18-203ENST00000558855 LYPD3O95274 346 aa11.75□□□□□ -0.53
VPS18-203ENST00000558855 WNT11O96014 354 aa11.75□□□□□ -0.53
VPS18-203ENST00000558855 IGKV3-15P01624 115 aa11.75□□□□□ -0.53
VPS18-203ENST00000558855 OPN1SWP03999 348 aa11.75□□□□□ -0.53
VPS18-203ENST00000558855 TP53P04637 393 aaPredicted RBP11.75□□□□□ -0.53
VPS18-203ENST00000558855 GPX2P18283 190 aa11.75□□□□□ -0.53
VPS18-203ENST00000558855 IDH3GP51553 393 aaPredicted RBP11.75□□□□□ -0.53
VPS18-203ENST00000558855 STX1BP61266 288 aa11.75□□□□□ -0.53
VPS18-203ENST00000558855 SRSF2Q01130 221 aaKnown RBP11.75□□□□□ -0.53
VPS18-203ENST00000558855 SCARB2Q14108 478 aa11.75□□□□□ -0.53
VPS18-203ENST00000558855 AGKQ53H12 422 aa11.75□□□□□ -0.53
VPS18-203ENST00000558855 CARD17Q5XLA6 110 aa11.75□□□□□ -0.53
VPS18-203ENST00000558855 REEP3Q6NUK4 255 aa11.75□□□□□ -0.53
VPS18-203ENST00000558855 KLHL24Q6TFL4 600 aa11.75□□□□□ -0.53
VPS18-203ENST00000558855 RBM45Q8IUH3 476 aaKnown RBP11.75□□□□□ -0.53
VPS18-203ENST00000558855 DEPDC4Q8N2C3 294 aa11.75□□□□□ -0.53
VPS18-203ENST00000558855 MAGEE2Q8TD90 523 aaPredicted RBP11.75□□□□□ -0.53
VPS18-203ENST00000558855 SLC35B4Q969S0 331 aa11.75□□□□□ -0.53
VPS18-203ENST00000558855 SLC41A3Q96GZ6 507 aa11.75□□□□□ -0.53
VPS18-203ENST00000558855 ZNF75AQ96N20 296 aa11.75□□□□□ -0.53
VPS18-203ENST00000558855 OXGR1Q96P68 337 aa11.75□□□□□ -0.53
VPS18-203ENST00000558855 CCDC28BQ9BUN5 200 aa11.75□□□□□ -0.53
VPS18-203ENST00000558855 KATNB1Q9BVA0 655 aa11.75□□□□□ -0.53
VPS18-203ENST00000558855 THUMPD1Q9NXG2 353 aaKnown RBP11.75□□□□□ -0.53
VPS18-203ENST00000558855 ZNF224Q9NZL3 707 aa11.75□□□□□ -0.53
VPS18-203ENST00000558855 RCE1Q9Y256 329 aa11.75□□□□□ -0.53
VPS18-203ENST00000558855 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.74□□□□□ -0.535e-7■■■■□ 19.6
VPS18-203ENST00000558855 C5orf58C9J3I9 102 aa11.74□□□□□ -0.53
VPS18-203ENST00000558855 MFN2O95140 757 aa11.74□□□□□ -0.53
VPS18-203ENST00000558855 F12P00748 615 aaPredicted RBP11.74□□□□□ -0.53
VPS18-203ENST00000558855 ZNF43P17038 809 aa11.74□□□□□ -0.53
VPS18-203ENST00000558855 THBS4P35443 961 aa11.74□□□□□ -0.53
VPS18-203ENST00000558855 CRYBA2P53672 197 aa11.74□□□□□ -0.53
VPS18-203ENST00000558855 CDH12P55289 794 aa11.74□□□□□ -0.53
VPS18-203ENST00000558855 PCBP3P57721 371 aaKnown RBP11.74□□□□□ -0.53
VPS18-203ENST00000558855 OR1Q1Q15612 314 aa11.74□□□□□ -0.53
VPS18-203ENST00000558855 ZSWIM7Q19AV6 140 aa11.74□□□□□ -0.53
VPS18-203ENST00000558855 ALG10BQ5I7T1 473 aa11.74□□□□□ -0.53
VPS18-203ENST00000558855 FAM69AQ5T7M9 428 aa11.74□□□□□ -0.53
VPS18-203ENST00000558855 MDP1Q86V88 176 aa11.74□□□□□ -0.53
VPS18-203ENST00000558855 SMYD1Q8NB12 490 aa11.74□□□□□ -0.53
VPS18-203ENST00000558855 LRRC8CQ8TDW0 803 aa11.74□□□□□ -0.53
VPS18-203ENST00000558855 SLC38A4Q969I6 547 aa11.74□□□□□ -0.53
VPS18-203ENST00000558855 MS4A3Q96HJ5 214 aa11.74□□□□□ -0.53
VPS18-203ENST00000558855 ATP6V1G3Q96LB4 118 aa11.74□□□□□ -0.53
VPS18-203ENST00000558855 RAD21L1Q9H4I0 556 aa11.74□□□□□ -0.53
VPS18-203ENST00000558855 C12orf10Q9HB07 376 aa11.74□□□□□ -0.53
VPS18-203ENST00000558855 CRLF2Q9HC73 371 aa11.74□□□□□ -0.53
VPS18-203ENST00000558855 OBP2BQ9NPH6 170 aa11.74□□□□□ -0.53
VPS18-203ENST00000558855 RPS6KB2Q9UBS0 482 aa11.74□□□□□ -0.53
VPS18-203ENST00000558855 TRAV36DV7A0A075B6V5 113 aa11.73□□□□□ -0.53
VPS18-203ENST00000558855 A0A087WUJ7 227 aa11.73□□□□□ -0.53
VPS18-203ENST00000558855 IGHV2OR16-5A0A0B4J2B6 119 aa11.73□□□□□ -0.53
VPS18-203ENST00000558855 TMEM247A6NEH6 219 aa11.73□□□□□ -0.53
VPS18-203ENST00000558855 M0R3G1 203 aa11.73□□□□□ -0.53
VPS18-203ENST00000558855 AIM2O14862 343 aa11.73□□□□□ -0.53
VPS18-203ENST00000558855 TGDSO95455 350 aa11.73□□□□□ -0.53
VPS18-203ENST00000558855 HLA-HP01893 362 aa11.73□□□□□ -0.53
VPS18-203ENST00000558855 OR4A8P0C604 315 aa11.73□□□□□ -0.53
VPS18-203ENST00000558855 SLC25A16P16260 332 aa11.73□□□□□ -0.53
VPS18-203ENST00000558855 IGFBP5P24593 272 aa11.73□□□□□ -0.53
VPS18-203ENST00000558855 RGS8P57771 180 aaPredicted RBP11.73□□□□□ -0.53
VPS18-203ENST00000558855 MTPNP58546 118 aa11.73□□□□□ -0.53
VPS18-203ENST00000558855 UBE2NP61088 152 aaKnown RBP11.73□□□□□ -0.53
VPS18-203ENST00000558855 NPRL3Q12980 569 aa11.73□□□□□ -0.53
VPS18-203ENST00000558855 GGTLC2Q14390 218 aa11.73□□□□□ -0.53
VPS18-203ENST00000558855 DUSP7Q16829 419 aa11.73□□□□□ -0.53
VPS18-203ENST00000558855 RUNDC3AQ59EK9 446 aa11.73□□□□□ -0.53
VPS18-203ENST00000558855 ABHD12BQ7Z5M8 362 aaPredicted RBP11.73□□□□□ -0.53
VPS18-203ENST00000558855 CDK20Q8IZL9 346 aa11.73□□□□□ -0.53
VPS18-203ENST00000558855 FGFBP3Q8TAT2 258 aa11.73□□□□□ -0.53
VPS18-203ENST00000558855 FOXN4Q96NZ1 517 aa11.73□□□□□ -0.53
VPS18-203ENST00000558855 PLK3Q9H4B4 646 aa11.73□□□□□ -0.53
VPS18-203ENST00000558855 TMEM38AQ9H6F2 299 aa11.73□□□□□ -0.53
VPS18-203ENST00000558855 B3GNT2Q9NY97 397 aa11.73□□□□□ -0.53
VPS18-203ENST00000558855 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.73□□□□□ -0.53
VPS18-203ENST00000558855 TESQ9UGI8 421 aaKnown RBP11.73□□□□□ -0.53
VPS18-203ENST00000558855 SLC43A1O75387 559 aa11.72□□□□□ -0.53
VPS18-203ENST00000558855 ERLIN1O75477 346 aa11.72□□□□□ -0.53
VPS18-203ENST00000558855 CRYAAP02489 173 aa11.72□□□□□ -0.53
VPS18-203ENST00000558855 CBR1P16152 277 aa11.72□□□□□ -0.53
VPS18-203ENST00000558855 USF1P22415 310 aaPredicted RBP11.72□□□□□ -0.53
VPS18-203ENST00000558855 GTF2E2P29084 291 aaKnown RBP11.72□□□□□ -0.53
VPS18-203ENST00000558855 IL2RGP31785 369 aa11.72□□□□□ -0.53
VPS18-203ENST00000558855 SERPINF1P36955 418 aa11.72□□□□□ -0.53
VPS18-203ENST00000558855 NR4A2P43354 598 aa11.72□□□□□ -0.53
VPS18-203ENST00000558855 ATP4BP51164 291 aa11.72□□□□□ -0.53
VPS18-203ENST00000558855 DSCR9P59020 149 aa11.72□□□□□ -0.53
VPS18-203ENST00000558855 POU3F1Q03052 451 aaPredicted RBP11.72□□□□□ -0.53
VPS18-203ENST00000558855 CHRNB3Q05901 458 aa11.72□□□□□ -0.53
VPS18-203ENST00000558855 SQLEQ14534 574 aa11.72□□□□□ -0.53
VPS18-203ENST00000558855 LINC00114Q6XXX2 140 aa11.72□□□□□ -0.53
VPS18-203ENST00000558855 H1FNTQ75WM6 255 aaPredicted RBP11.72□□□□□ -0.53
VPS18-203ENST00000558855 C20orf196Q8IYI0 205 aa11.72□□□□□ -0.53
VPS18-203ENST00000558855 SVOPLQ8N434 492 aa11.72□□□□□ -0.53
VPS18-203ENST00000558855 ADPRHL1Q8NDY3 354 aa11.72□□□□□ -0.53
VPS18-203ENST00000558855 OR6T1Q8NGN1 323 aa11.72□□□□□ -0.53
VPS18-203ENST00000558855 RNF217Q8TC41 542 aa11.72□□□□□ -0.53
VPS18-203ENST00000558855 MSI2Q96DH6 328 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms