RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 NRG3P56975 720 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 RPS11P62280 158 aaKnown RBP eCLIP9.64□□□□□ -0.87
CUX1-217ENST00000558836 LGALS3BPQ08380 585 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 CDK5R1Q15078 307 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 ZSWIM7Q19AV6 140 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 HBMQ6B0K9 141 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 WDR74Q6RFH5 385 aaPredicted RBP9.64□□□□□ -0.87
CUX1-217ENST00000558836 HIST3H2AQ7L7L0 130 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 PM20D2Q8IYS1 436 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 LRRC75AQ8NAA5 344 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 UBASH3BQ8TF42 649 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 HIST1H2ACQ93077 130 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 NMNAT2Q9BZQ4 307 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 TSPAN10Q9H1Z9 355 aaPredicted RBP9.64□□□□□ -0.87
CUX1-217ENST00000558836 ZNF768Q9H5H4 540 aaKnown RBP9.64□□□□□ -0.87
CUX1-217ENST00000558836 EVA1AQ9H8M9 152 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 MRTO4Q9UKD2 239 aaKnown RBP9.64□□□□□ -0.87
CUX1-217ENST00000558836 A0A0G2JK05 382 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 TPPPO94811 219 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 OPN1LWP04000 364 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 IL11P20809 199 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 EVI2BP34910 448 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 HTR3AP46098 478 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 RNF4P78317 190 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 POU4F2Q12837 409 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 KCNJ8Q15842 424 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 HLA-BQ31612 363 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 AGAP6Q5VW22 663 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 RSBN1Q5VWQ0 802 aaPredicted RBP9.63□□□□□ -0.87
CUX1-217ENST00000558836 ZNF57Q68EA5 555 aaPredicted RBP9.63□□□□□ -0.87
CUX1-217ENST00000558836 MZT2AQ6P582 158 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 TMEM71Q6P5X7 295 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 DPY19L4Q7Z388 723 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 RAB43Q86YS6 212 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 RDH10Q8IZV5 341 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 EID2Q8N6I1 236 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 TRMT10AQ8TBZ6 339 aaKnown RBP9.63□□□□□ -0.87
CUX1-217ENST00000558836 GPR119Q8TDV5 335 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 SMIM19Q96E16 107 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 AGAP4Q96P64 663 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 SLC19A3Q9BZV2 496 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 LAT2Q9GZY6 243 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 HDHD2Q9H0R4 259 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 RXFP3Q9NSD7 469 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 TAS2R5Q9NYW4 299 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 NLKQ9UBE8 527 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 VDAC3Q9Y277 283 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 NOX1Q9Y5S8 564 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 RALGAPA1Q6GYQ0 2036 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 MEIOCA2RUB1 952 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 SCRG1O75711 98 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 SLC25A12O75746 678 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 SC5DO75845 299 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 SRP9P49458 86 aaKnown RBP9.63□□□□□ -0.87
CUX1-217ENST00000558836 QPRTQ15274 297 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 ETFDHQ16134 617 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 CDONQ4KMG0 1287 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 LRRC69Q6ZNQ3 347 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 UBQLNLQ8IYU4 475 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 IZUMO1Q8IYV9 350 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 ZNF433Q8N7K0 673 aaPredicted RBP9.63□□□□□ -0.87
CUX1-217ENST00000558836 POMGNT2Q8NAT1 580 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 ADAD1Q96M93 576 aaKnown RBP9.63□□□□□ -0.87
CUX1-217ENST00000558836 TMEM43Q9BTV4 400 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 ADAM19Q9H013 955 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 SLC22A4Q9H015 551 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 A0A0B4J293 547 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 LY6G6EA0A0G2JKS1 128 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 ALG1L2C9J202 215 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 RAD1O60671 282 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 GLCEO94923 617 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 ZFPL1O95159 310 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 HEXBP07686 556 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 ATF1P18846 271 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 RAB3BP20337 219 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 SDHAP31040 664 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 UQCRC1P31930 480 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 SOX2P48431 317 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 INPP1P49441 399 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 CLDN12P56749 244 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 BIKQ13323 160 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 NKAIN1Q4KMZ8 207 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 LCN1P1Q5VSP4 162 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 FAM199XQ6PEV8 388 aaPredicted RBP9.63□□□□□ -0.87
CUX1-217ENST00000558836 PAMR1Q6UXH9 720 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 PRSS42Q7Z5A4 293 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 PXKQ7Z7A4 578 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 APCDD1LQ8NCL9 501 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 OR6N2Q8NGY6 317 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 SETD6Q8TBK2 473 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 ENKURQ8TC29 256 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 DERL3Q96Q80 235 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 SOSTQ9BQB4 213 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 NOX4Q9NPH5 578 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 EXOSC3Q9NQT5 275 aaKnown RBP9.63□□□□□ -0.87
CUX1-217ENST00000558836 IKZF2Q9UKS7 526 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 U3KQA8 63 aa9.63□□□□□ -0.87
CUX1-217ENST00000558836 SUSD5O60279 629 aa9.62□□□□□ -0.87
CUX1-217ENST00000558836 AKR7A3O95154 331 aa9.62□□□□□ -0.87
CUX1-217ENST00000558836 HLA-DQA2P01906 255 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms