RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	LRRC74B	Q6ZQY2	392 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	CCDC121	Q6ZUS5	278 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	SNX32	Q86XE0	403 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	FUNDC1	Q8IVP5	155 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	CLIP4	Q8N3C7	705 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	CADM2	Q8N3J6	435 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	TMEM99	Q8N816	258 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	ZIC4	Q8N9L1	334 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	WDR31	Q8NA23	367 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	PCYOX1L	Q8NBM8	494 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	OR9I1	Q8NGQ6	314 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	SLC25A43	Q8WUT9	341 aa	Predicted RBP	6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	WDR60	Q8WVS4	1066 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	SPDL1	Q96EA4	605 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	ZHX1-C8orf76	Q96EF9	292 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	TRMT61A	Q96FX7	289 aa	Known RBP	6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	AURKB	Q96GD4	344 aa	Predicted RBP	6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	HS6ST2	Q96MM7	605 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	TRNT1	Q96Q11	434 aa	Known RBP	6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	KRTAP4-2	Q9BYR5	136 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	ZCCHC4	Q9H5U6	513 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	MTHFD2L	Q9H903	347 aa	Predicted RBP	6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	EFCAB1	Q9HAE3	211 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	EXOSC3	Q9NQT5	275 aa	Known RBP	6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	SLC7A10	Q9NS82	523 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	ASB6	Q9NWX5	421 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	NDE1	Q9NXR1	346 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	TMEM181	Q9P2C4	612 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	TAGLN3	Q9UI15	199 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	LEF1	Q9UJU2	399 aa	Predicted RBP	6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	B3GALT5	Q9Y2C3	310 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	NDUFAF1	Q9Y375	327 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	HDGFL3	Q9Y3E1	203 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	SLC25A15	Q9Y619	301 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	SPIN1	Q9Y657	262 aa	Predicted RBP	6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	RTTN	Q86VV8	2226 aa		6.13	□□□□□ -1.43
MARK3-215	ENST00000558787	CUBN	O60494	3623 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	IGHV4-30-2	A0A087WSY4	118 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	PDLIM1	O00151	329 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	NR5A2	O00482	541 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	RFXANK	O14593	260 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	GPR171	O14626	319 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	FRS3	O43559	492 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	TMCC2	O75069	709 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	CRLF1	O75462	422 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	LY6H	O94772	140 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	UBOX5	O94941	541 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	DBI	P07108	87 aa	Known RBP	6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	TFPT	P0C1Z6	253 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	HOXA5	P20719	270 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	RPS4Y1	P22090	263 aa	Known RBP	6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	CD40	P25942	277 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	ACAA2	P42765	397 aa	Known RBP	6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	SLC1A3	P43003	542 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	CRAT	P43155	626 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	MAGEA8	P43361	318 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	HTR3A	P46098	478 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	CLK1	P49759	484 aa	Known RBP	6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	RASSF2	P50749	326 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	FABP6	P51161	128 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	MVD	P53602	400 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	SLC16A1	P53985	500 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	SLC35A1	P78382	337 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	SRSF3	P84103	164 aa	Known RBP	6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	DMTN	Q08495	405 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	EPS8	Q12929	822 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	SLC17A1	Q14916	467 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	OR7A5	Q15622	319 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	ZSCAN26	Q16670	478 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	HIKESHI	Q53FT3	197 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	OTUD3	Q5T2D3	398 aa	Predicted RBP	6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	TMEM108	Q6UXF1	575 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	ZNF836	Q6ZNA1	936 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	DTX2	Q86UW9	622 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	P2RY8	Q86VZ1	359 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	KDM8	Q8N371	416 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	DPP10	Q8N608	796 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	TRIML2	Q8N7C3	387 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	OR52P1P	Q8NH57	321 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	PIGX	Q8TBF5	258 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	SLC38A5	Q8WUX1	472 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	VPS33A	Q96AX1	596 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	NSL1	Q96IY1	281 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	ITCH	Q96J02	903 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	MUS81	Q96NY9	551 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	ZNF385A	Q96PM9	386 aa	Known RBP	6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	NAA11	Q9BSU3	229 aa	Predicted RBP	6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	CACNG6	Q9BXT2	260 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	GCM1	Q9NP62	436 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	YAE1D1	Q9NRH1	226 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	GID8	Q9NWU2	228 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	UPB1	Q9UBR1	384 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	POU2F3	Q9UKI9	436 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	TRAPPC4	Q9Y296	219 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	CHST2	Q9Y4C5	530 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	PCDHB14	Q9Y5E9	798 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	FLVCR1	Q9Y5Y0	555 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	ATP23	Q9Y6H3	246 aa		6.12	□□□□□ -1.43
MARK3-215	ENST00000558787	CR1	P17927	2039 aa		6.11	□□□□□ -1.43
MARK3-215	ENST00000558787	SVEP1	Q4LDE5	3571 aa		6.11	□□□□□ -1.43

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