RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 IL5RAQ01344 420 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 C19orf57Q0VDD7 668 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 SNAPC1Q16533 368 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 MEDAGQ5VYS4 303 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 PTCHD4Q6ZW05 846 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 CCDC71Q8IV32 467 aaPredicted RBP13.31□□□□□ -0.28
VPS18-202ENST00000558474 UEVLDQ8IX04 471 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 UBQLNLQ8IYU4 475 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 ENTHD1Q8IYW4 607 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 FAM26EQ8N5C1 309 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 FAR1Q8WVX9 515 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 PLEKHA8Q96JA3 519 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 NR1H4Q96RI1 486 aaPredicted RBP13.31□□□□□ -0.28
VPS18-202ENST00000558474 UCN2Q96RP3 112 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 KATNB1Q9BVA0 655 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 YTHDF1Q9BYJ9 559 aaKnown RBP13.31□□□□□ -0.28
VPS18-202ENST00000558474 PNPLA3Q9NST1 481 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 TVP23BQ9NYZ1 205 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 GRHPRQ9UBQ7 328 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 IL20RAQ9UHF4 553 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 MCTS1Q9ULC4 181 aaKnown RBP13.31□□□□□ -0.28
VPS18-202ENST00000558474 ZNF175Q9Y473 711 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 IER3IP1Q9Y5U9 82 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 SH3D21A4FU49 640 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 A6NIZ1 184 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 SNTNA6NMZ2 147 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 RIIAD1A6NNX1 92 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 AHRRA9YTQ3 701 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 CENPBD1B2RD01 187 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 SMAD9O15198 467 aaKnown RBP13.3□□□□□ -0.28
VPS18-202ENST00000558474 CXCL13O43927 109 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 CYTIPO60759 359 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 PPP1R3DO95685 299 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 CLIC3O95833 236 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 ZNF3P17036 446 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 GABRB1P18505 474 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 SLC16A1P53985 500 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 RAP1BP61224 184 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 RPL27P61353 136 aaKnown RBP13.3□□□□□ -0.28
VPS18-202ENST00000558474 RAP1AP62834 184 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 HSF1Q00613 529 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 MAD2L1BPQ15013 274 aaPredicted RBP13.3□□□□□ -0.28
VPS18-202ENST00000558474 OCLNQ16625 522 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 TMEM201Q5SNT2 666 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 GTF2IRD2BQ6EKJ0 949 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 ABLIM2Q6H8Q1 611 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 ADCK1Q86TW2 530 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 GTF2IRD2Q86UP8 949 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 IQCF1Q8N6M8 205 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 TMEM163Q8TC26 289 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 DNAJA3Q96EY1 480 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 ADAD1Q96M93 576 aaKnown RBP13.3□□□□□ -0.28
VPS18-202ENST00000558474 SRXN1Q9BYN0 137 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 RNF122Q9H9V4 155 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 GP6Q9HCN6 339 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 B3GAT1Q9P2W7 334 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 SEC14L4Q9UDX3 406 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 RNF6Q9Y252 685 aa13.3□□□□□ -0.28
VPS18-202ENST00000558474 C11orf98E9PRG8 122 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 H0YC42 278 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 AKAP8O43823 692 aaKnown RBP13.29□□□□□ -0.28
VPS18-202ENST00000558474 F13BP05160 661 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 HOXD4P09016 255 aaPredicted RBP13.29□□□□□ -0.28
VPS18-202ENST00000558474 FCGR2AP12318 317 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 ZNF43P17038 809 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 PAICSP22234 425 aaKnown RBP13.29□□□□□ -0.28
VPS18-202ENST00000558474 PTGER4P35408 488 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 ERVK-25P63136 954 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 CD47Q08722 323 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 CDK5R2Q13319 367 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 TOP3AQ13472 1001 aaPredicted RBP13.29□□□□□ -0.28
VPS18-202ENST00000558474 SLC17A1Q14916 467 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 RNPS1Q15287 305 aaKnown RBP13.29□□□□□ -0.28
VPS18-202ENST00000558474 ACKR1Q16570 336 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 GXYLT1Q4G148 440 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 NHLRC1Q6VVB1 395 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 SLC35D2Q76EJ3 337 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 FCRLAQ7L513 359 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 ADGRE4PQ86SQ3 457 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 ARIH2OSQ8N7S6 290 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 TCEANCQ8N8B7 351 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 ZNF519Q8TB69 540 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 FNDC8Q8TC99 324 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 HDAC2Q92769 488 aaKnown RBP13.29□□□□□ -0.28
VPS18-202ENST00000558474 TSPAN32Q96QS1 320 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 SLX1AQ9BQ83 275 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 ZNF226Q9NYT6 803 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 ZNF346Q9UL40 294 aaKnown RBP13.29□□□□□ -0.28
VPS18-202ENST00000558474 CAMK2AQ9UQM7 478 aa13.29□□□□□ -0.28
VPS18-202ENST00000558474 MGAQ8IWI9 3026 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 IGKV3D-15A0A087WSY6 115 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 A0A1B0GTH9 108 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 NPIPA2E9PIF3 369 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 NPIPA3F8WFD2 350 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 XKRYO14609 159 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 GPR171O14626 319 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 PRKYO43930 277 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 BCL10O95999 233 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 CCDC159P0C7I6 412 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 NR2C1P13056 603 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms