RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 BHLHA15Q7RTS1 189 aaPredicted RBP10.91□□□□□ -0.66
SMAD3-205ENST00000558428 NANOGNBQ7Z5D8 188 aa10.91□□□□□ -0.66
SMAD3-205ENST00000558428 TSEN54Q7Z6J9 526 aaKnown RBP10.91□□□□□ -0.66
SMAD3-205ENST00000558428 DHFR2Q86XF0 187 aa10.91□□□□□ -0.66
SMAD3-205ENST00000558428 LRRC17Q8N6Y2 441 aa10.91□□□□□ -0.66
SMAD3-205ENST00000558428 HIST1H2ACQ93077 130 aa10.91□□□□□ -0.66
SMAD3-205ENST00000558428 MCUR1Q96AQ8 359 aa10.91□□□□□ -0.66
SMAD3-205ENST00000558428 S100PBPQ96BU1 408 aa10.91□□□□□ -0.66
SMAD3-205ENST00000558428 SLC7A6OSQ96CW6 309 aaPredicted RBP10.91□□□□□ -0.66
SMAD3-205ENST00000558428 C7orf34Q96L11 122 aa10.91□□□□□ -0.66
SMAD3-205ENST00000558428 OR10A4Q9H209 315 aa10.91□□□□□ -0.66
SMAD3-205ENST00000558428 MUC13Q9H3R2 512 aa10.91□□□□□ -0.66
SMAD3-205ENST00000558428 MCCC2Q9HCC0 563 aa10.91□□□□□ -0.66
SMAD3-205ENST00000558428 SLC7A10Q9NS82 523 aa10.91□□□□□ -0.66
SMAD3-205ENST00000558428 ZNF226Q9NYT6 803 aa10.91□□□□□ -0.66
SMAD3-205ENST00000558428 MALT1Q9UDY8 824 aa10.91□□□□□ -0.66
SMAD3-205ENST00000558428 ZNF229Q9UJW7 825 aa10.91□□□□□ -0.66
SMAD3-205ENST00000558428 NOX1Q9Y5S8 564 aa10.91□□□□□ -0.66
SMAD3-205ENST00000558428 SPG11Q96JI7 2443 aa10.91□□□□□ -0.66
SMAD3-205ENST00000558428 TACC2O95359 2948 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 CIB4A0PJX0 185 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 TRAF3IP2O43734 574 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-205ENST00000558428 AKAP8O43823 692 aaKnown RBP10.9□□□□□ -0.66
SMAD3-205ENST00000558428 KRT33AO76009 404 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 STAMBPO95630 424 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 SEMG1P04279 462 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 FABP3P05413 133 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 H1F0P07305 194 aaKnown RBP10.9□□□□□ -0.66
SMAD3-205ENST00000558428 ASAH2BP0C7U1 165 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 IFI30P13284 250 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 FUT1P19526 365 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 COX5AP20674 150 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 DNAJA1P31689 397 aaKnown RBP10.9□□□□□ -0.66
SMAD3-205ENST00000558428 LSM11P83369 360 aaKnown RBP eCLIP10.9□□□□□ -0.66
SMAD3-205ENST00000558428 MS4A2Q01362 244 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 BNIP1Q12981 228 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 MTX3Q5HYI7 312 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 LCN8Q6JVE9 175 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 ZNF730Q6ZMV8 503 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 C22orf34Q6ZV56 151 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 RRM2BQ7LG56 351 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 ZNF433Q8N7K0 673 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-205ENST00000558428 POMGNT2Q8NAT1 580 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 PIK3C3Q8NEB9 887 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 ACOT11Q8WXI4 607 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-205ENST00000558428 ASB9Q96DX5 294 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 BTBD10Q9BSF8 475 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 ANKRD19PQ9H560 264 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 NMNAT1Q9HAN9 279 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-205ENST00000558428 MED29Q9NX70 200 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 TAS2R16Q9NYV7 291 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 RCE1Q9Y256 329 aa10.9□□□□□ -0.66
SMAD3-205ENST00000558428 A0A087WUU8 490 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 OR6C65A6NJZ3 312 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 BLOC1S5-TXNDC5H3BN57 136 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 RNF13O43567 381 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 SLC43A1O75387 559 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 CTAG2O75638 210 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 RAD51DO75771 328 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 ZNF432O94892 652 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 THBDP07204 575 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 ITGA5P08648 1049 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 CRYGSP22914 178 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 FOXG1P55316 489 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-205ENST00000558428 LGALS3BPQ08380 585 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 ZP4Q12836 540 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 STK11Q15831 433 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 FGD3Q5JSP0 725 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 C9orf135Q5VTT2 229 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 ALKBH2Q6NS38 261 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 TBPL2Q6SJ96 375 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 ABHD12BQ7Z5M8 362 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-205ENST00000558428 PXKQ7Z7A4 578 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 WFDC8Q8IUA0 241 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 ZDHHC21Q8IVQ6 265 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 NRMQ8IXM6 262 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 RNF113BQ8IZP6 322 aaKnown RBP10.89□□□□□ -0.67
SMAD3-205ENST00000558428 ANKK1Q8NFD2 765 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 BPIFA2Q96DR5 249 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 LRGUKQ96M69 825 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 ALKBH3Q96Q83 286 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-205ENST00000558428 SEPHS2Q99611 448 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 PIP5K1AQ99755 562 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 USB1Q9BQ65 265 aaKnown RBP10.89□□□□□ -0.67
SMAD3-205ENST00000558428 IL1RAPQ9NPH3 570 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 RASSF1Q9NS23 344 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 TAS2R5Q9NYW4 299 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 CADP27708 2225 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 ROS1P08922 2347 aa10.89□□□□□ -0.67
SMAD3-205ENST00000558428 CSMD1Q96PZ7 3565 aa10.88□□□□□ -0.67
SMAD3-205ENST00000558428 A0A1W2PRQ8 180 aa10.88□□□□□ -0.67
SMAD3-205ENST00000558428 TCRBV5S2A0A599 114 aa10.88□□□□□ -0.67
SMAD3-205ENST00000558428 FAM221AA4D161 298 aa10.88□□□□□ -0.67
SMAD3-205ENST00000558428 SLC35F4A4IF30 521 aa10.88□□□□□ -0.67
SMAD3-205ENST00000558428 HTR3EA5X5Y0 456 aa10.88□□□□□ -0.67
SMAD3-205ENST00000558428 ZNF587BE7ETH6 402 aa10.88□□□□□ -0.67
SMAD3-205ENST00000558428 PDLIM1O00151 329 aa10.88□□□□□ -0.67
SMAD3-205ENST00000558428 UPK3AO75631 287 aa10.88□□□□□ -0.67
SMAD3-205ENST00000558428 DNAJC8O75937 253 aaPredicted RBP10.88□□□□□ -0.67
SMAD3-205ENST00000558428 ATP5HO75947 161 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms