RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 IFNW1P05000 195 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 AHCYP23526 432 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 HOXC12P31275 282 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 OR1E2P47887 323 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 IST1P53990 364 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 SH3BGRP55822 239 aaPredicted RBP7.47□□□□□ -1.21
TPM1-213ENST00000558400 CLDN17P56750 224 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 PRPS1P60891 318 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 IL1RL1Q01638 556 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 PUDPQ08623 228 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 ZP4Q12836 540 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 PIN1Q13526 163 aaPredicted RBP7.47□□□□□ -1.21
TPM1-213ENST00000558400 STK11Q15831 433 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 GABRA6Q16445 453 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 ACKR1Q16570 336 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 MS4A18Q3C1V0 323 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 IFI44LQ53G44 452 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 SAMD4BQ5PRF9 694 aaKnown RBP7.47□□□□□ -1.21
TPM1-213ENST00000558400 GLYATQ6IB77 296 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 HMBOX1Q6NT76 420 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 NIPAL3Q6P499 406 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 KLHL17Q6TDP4 642 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 C16orf89Q6UX73 402 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 DEF8Q6ZN54 512 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 C20orf204Q6ZNR8 217 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 CYP4Z1Q86W10 505 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 EPHX4Q8IUS5 362 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 CCDC36Q8IYA8 594 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 CDK20Q8IZL9 346 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 RNF113BQ8IZP6 322 aaKnown RBP7.47□□□□□ -1.21
TPM1-213ENST00000558400 PGAM4Q8N0Y7 254 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 ARHGAP24Q8N264 748 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 KDM8Q8N371 416 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 CCDC197Q8NCU1 140 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 PIK3C3Q8NEB9 887 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 GEMIN6Q8WXD5 167 aaKnown RBP7.47□□□□□ -1.21
TPM1-213ENST00000558400 FAM162AQ96A26 154 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 PLPPR2Q96GM1 343 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 NSL1Q96IY1 281 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 ADAD1Q96M93 576 aaKnown RBP7.47□□□□□ -1.21
TPM1-213ENST00000558400 FOXC2Q99958 501 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 AMBRA1Q9C0C7 1298 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 GORASP2Q9H8Y8 452 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 OBP2BQ9NPH6 170 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 FAM53CQ9NYF3 392 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 ZNF229Q9UJW7 825 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 USP22Q9UPT9 525 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 MGAT4BQ9UQ53 548 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 AMDHD2Q9Y303 409 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 MED31Q9Y3C7 131 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 FAM32AQ9Y421 112 aaKnown RBP7.47□□□□□ -1.21
TPM1-213ENST00000558400 ENTPD5O75356 428 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 RAD51DO75771 328 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 ZNF432O94892 652 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 LYPD3O95274 346 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 ZNF682O95780 498 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 CH25HO95992 272 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 SERPINA1P01009 418 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 THY1P04216 161 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 CD3EP07766 207 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 ADORA3P0DMS8 318 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 HSD17B1P14061 328 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 ITGA2P17301 1181 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 CBLP22681 906 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 EDNRAP25101 427 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 PTAFRP25105 342 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 LTBQ06643 244 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 TSC22D1Q15714 1073 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 ZNF74Q16587 644 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 ANKDD1AQ495B1 522 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 NCMAPQ5T1S8 102 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 ALKBH2Q6NS38 261 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 ADAM5Q6NVV9 412 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 KLHL24Q6TFL4 600 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 TMEM108Q6UXF1 575 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 PAMR1Q6UXH9 720 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 RRM2BQ7LG56 351 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.46□□□□□ -1.22
TPM1-213ENST00000558400 P3H2Q8IVL5 708 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 DEPDC4Q8N2C3 294 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 GPR137CQ8N3F9 429 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 MAGEE2Q8TD90 523 aaPredicted RBP7.46□□□□□ -1.22
TPM1-213ENST00000558400 TMEM239Q8WW34 195 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 LIPHQ8WWY8 451 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 POP5Q969H6 163 aaKnown RBP7.46□□□□□ -1.22
TPM1-213ENST00000558400 PRRC1Q96M27 445 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 MOGAT1Q96PD6 335 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 ALPK1Q96QP1 1244 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 CDRT15Q96T59 188 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 PIP5K1AQ99755 562 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 PRSS27Q9BQR3 290 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 FNDC11Q9BVV2 318 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 ANKRD19PQ9H560 264 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 B3GAT2Q9NPZ5 323 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 CCM2LQ9NUG4 571 aaPredicted RBP7.46□□□□□ -1.22
TPM1-213ENST00000558400 DCAF13Q9NV06 445 aaKnown RBP7.46□□□□□ -1.22
TPM1-213ENST00000558400 BEX4Q9NWD9 120 aaPredicted RBP7.46□□□□□ -1.22
TPM1-213ENST00000558400 B3GAT1Q9P2W7 334 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 STX18Q9P2W9 335 aaKnown RBP7.46□□□□□ -1.22
TPM1-213ENST00000558400 SAMD4AQ9UPU9 718 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms